Gene RSc2046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2046 
Symbol 
ID1220886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2219592 
End bp2220053 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content68% 
IMG OID637238440 
Producthypothetical protein 
Protein accessionNP_520167 
Protein GI17546765 
COG category[S] Function unknown 
COG ID[COG5319] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.707585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.300905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGC TGGACCTCCG TTGTGCCAAT GACCATCGCT TCGAAGGCTG GTTCGGCTCC 
GATGCCGACC TGCAGTCGCA GCGCGAGCGC GGTCTGTTGA CGTGCCCGGT CTGCGGCCAT
ACCGAGGTTG AGCGCCTGCC GAGCGCACCG CGCCTGAACC TGTCGTCGTC GCGAACGGAT
GCCGCCCGGC AGAGCGGCAC CGTGAAGACA TCGGCGGACG AGGGTGGCGC GCCGGCGACC
CTGCAGCAGC GCTATCTCAA GGCCGTGCGC CACCTCCTGG CCAATACCGA GGACGTGGGC
GAGCGGTTTG CGGAAGAGGC GCGCCGGATG CACTACAACG AGGCGCCGGA GCGGGGCATT
CGCGGGACGA CATCGCACGA AGAGGCGCTG GAGCTGGCGG AGGAGGGCAT CGAGGTGATG
CCGCTGCTGG TGCCGGACGC GCTCAAGCAG CCTGTGCACT AG
 
Protein sequence
MKVLDLRCAN DHRFEGWFGS DADLQSQRER GLLTCPVCGH TEVERLPSAP RLNLSSSRTD 
AARQSGTVKT SADEGGAPAT LQQRYLKAVR HLLANTEDVG ERFAEEARRM HYNEAPERGI
RGTTSHEEAL ELAEEGIEVM PLLVPDALKQ PVH