Gene RSc2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2042 
Symbol 
ID1220882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2216085 
End bp2216573 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content69% 
IMG OID637238436 
Producthypothetical protein 
Protein accessionNP_520163 
Protein GI17546761 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.263317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTCA TCGAATCGCT CGACGCGCTG CGGGGATTGA TCGGCCAGGA GGTCGCGGTC 
AGCGACTGGG TGGAGATCAC GCAGCAGCAG GTCAACCAGT TTGCCGAGGC CACGGGAGAC
CGCCAGTGGA TCCACGTGGA TGTGGAGCGC GCCCGGCGCG AGTCGCCGTT CGGCGCGCCG
GTGGCGCACG GTTTCCTGAC GCTGTCGCTG CTGCCGGCGC TGATGCAGAG CGCGCTCGAC
ATGCCCGATG TGAAGATGGG CGTGAACTAC GGCCTGAACA AGGTCCGCTT TCCGGCGCCG
GTGCCGGTGG GCAGCCGTCT GCGCGCCCGC GTGAGCCTGC TGGAGATGGA GATGCTGCCG
CCGCTGCAGC CGTCGCCGGA TGCGCCCGCG CTGACCGGCG CGCAGATGAC CTGGGGCGTG
ACGATCGAGT GCGAAGGGCA GGCGCGGCCC GTGTGCGTGG CCGAGTCGAT TTCGCGCCGC
TATTCCTGA
 
Protein sequence
MRVIESLDAL RGLIGQEVAV SDWVEITQQQ VNQFAEATGD RQWIHVDVER ARRESPFGAP 
VAHGFLTLSL LPALMQSALD MPDVKMGVNY GLNKVRFPAP VPVGSRLRAR VSLLEMEMLP
PLQPSPDAPA LTGAQMTWGV TIECEGQARP VCVAESISRR YS