| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2006 |
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| Symbol | |
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| ID | 1220846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2184715 |
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| End bp | 2186301 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238400 |
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| Product | transport binding transmembrane protein |
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| Protein accession | NP_520127 |
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| Protein GI | 17546725 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0304834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCAC GCCCCCTGCT TCGCGCCCTG ATCCGCACCG TCGCCGCCTG CGTGCTGGCG
GGCGCCACCG CCGCGCCGCT GGCCGCGCGC GCCGACGACC TGCGCATCGG CCTGGCCGCC
GACGTGACCT CGATGGACCC GCACTGGAAC AACGCCGGGC CCAACAACGC GATGGCGCTG
CACATCTTCG AATCGCTGGT GTTCCTCGAC AAGAACGGCC GCTACGCGCC GGGCCTGGCC
ACCGCATGGA AGGCCGTCGA CGCCAATACG TGGGAGATCA AGCTGCGCCC GGGCGTCAAA
TGGAGCGACG GCACGCCCTT CACGGGCGAA GACGTGAAGG CATCGATCGA GCGCCCGGCG
CGGCTGACCA ACAGCCCGGG GCCGTTCACC AGCTACACCA AGTCGATCAC CGGCGTGCAG
ATCGTCGATC CGCTGACGGT GCGGCTGAAG CTGTCGATCC CGAACTACGC CAGCATCCCG
AACGACCTGA ACAGCCTGCC GATCATCCCG AAGAAGGTGG CCAACGCCAC ACAGGCCGAC
TTCGACGCCG GCCGCGCCAT GATCGGCACC GGCCCGTTCC TGTTCGACCA CTTCACGCGC
GGGCAGGAGA TCGTGCTGAA GAAAAACCCG AGCTACTGGG GCCACGCGCC GCAGTGGGAC
AAGGTGACCT TCAAGATCAT CACCGACAAC GCCGCGCGCA CGGCCGCGCT GCTGGCGGGC
GACGTGGACG TGGTGGAAGC CGTGCCCGCC GCCGATGTGC CGCGCATCCG GCAGAACAAG
GCCTTCCACC TGGAGCAGCA GGTGTCGTGG CGCACCCTCT TCTGGCAGAT GGACCAGAGC
CGCGACGCCT CGCCGTTCAT CACCGACCGC GCCGGCAAGC CGCTCGCGAA GAACCCGTTC
AAGGACCGCC GCGTGCGCGA GGCGGTGGCG CTGGCCATCA ACCGCGATGC CATCGTCACG
CGCGTGCTCG AAGGCCAGGG CGTGGTCGCA TCCAGCATCG TGTCGCCGCA GATCTTCGGA
CACCCGGGCG GCAAGCCCAT CCCGTACGAC CCCGAAGGCG CGAAGAAGCT GCTGGCGCAG
GCCGGCTACC CCGACGGCTT CGGGCTCACG CTGCATGCCA CCAACAACCG CTACCTGAAC
GACGCACAGG TCGCCCAGAC CACGGCGCAG CTGCTCACGC GCGTCGGCAT CCAGACCAAG
GTGGAGACGC TGCCGGTGGC GGCCTACTTC TCCAGGGCGC GCCAGGGCGA GTTCTCGTTC
ATGATGCTGG GCTGGGGCTC GGTGGCGGCG GACGTGGCGC TGCGCAGCAT CCTCGGCACG
CCCAACCCGC AGACCGGCTA TGGCACCTGG AACTGGGGCC GCTACAGCAA TCCGGAGCTC
GACAAGCTGG TGCAGGCTTC GCTGTCCACT GTCTCGGGCG ACCAGGCCCA CGAGCAGGCC
GCCAAGGCCG CGGCGCGCTT CGCGCAGAAC GACTACGCCA TCATTGCGTC GCATCACCAG
CTCGCCACCT GGGCGATGCG CAAGGGCATC CGCTATGAAG CGCGGACCGA CGAATGGTCG
CTCGCGCATC TGTTCACCCG GCAATGA
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| Protein sequence | MNPRPLLRAL IRTVAACVLA GATAAPLAAR ADDLRIGLAA DVTSMDPHWN NAGPNNAMAL
HIFESLVFLD KNGRYAPGLA TAWKAVDANT WEIKLRPGVK WSDGTPFTGE DVKASIERPA
RLTNSPGPFT SYTKSITGVQ IVDPLTVRLK LSIPNYASIP NDLNSLPIIP KKVANATQAD
FDAGRAMIGT GPFLFDHFTR GQEIVLKKNP SYWGHAPQWD KVTFKIITDN AARTAALLAG
DVDVVEAVPA ADVPRIRQNK AFHLEQQVSW RTLFWQMDQS RDASPFITDR AGKPLAKNPF
KDRRVREAVA LAINRDAIVT RVLEGQGVVA SSIVSPQIFG HPGGKPIPYD PEGAKKLLAQ
AGYPDGFGLT LHATNNRYLN DAQVAQTTAQ LLTRVGIQTK VETLPVAAYF SRARQGEFSF
MMLGWGSVAA DVALRSILGT PNPQTGYGTW NWGRYSNPEL DKLVQASLST VSGDQAHEQA
AKAAARFAQN DYAIIASHHQ LATWAMRKGI RYEARTDEWS LAHLFTRQ
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