| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1892 |
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| Symbol | |
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| ID | 1220731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2077977 |
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| End bp | 2078699 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637238285 |
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| Product | two-component system response regulator transcription regulator protein |
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| Protein accession | NP_520013 |
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| Protein GI | 17546611 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00502317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATTG CCGTTGTCCA CCCGAACCTT GAAGAAGCGG CATGGATCAT GCGTACCCTG
CGCACCGAAG GCTACAGCGC AGCCCATTAT GCCGACACCA GGGAATTCCT GAGGAGCATC
AAACGGGATT CGCACGATCT CGTGCTGATC TCGCATGCCG CCTCCCATCT CGCGCTGAGC
AAGCTTCCGA TGCTGATCCG CTCCCGGCTG CAGCAGCACA CACCGTTGCT GCTGGTCGGA
CACGACCACG ACGAGGATGC CGTCGCCGCC AGCCTGGGCG CCGGCGCGGA CGGCTACATC
GCGCTGCCGA TCAGCCCGGC GCTGTTTTCG GCGCGGGTCA CCGCGCTGCT GCGCCGCATC
TATCCGATCC GCGCGGCAAG GCAGACCTTC ATGGTCGGCC CTTACGAGCT CAATCAGCGG
GAATACCGGA TCAAACTGCA CGGGGCGGAC ATTCCCCTGA GCCACACCGA GGCCCGCCTG
GCCATCTTTC TGTTCTGCAA TGTCGGCCGC GTCCTGTCCA GGAGCCATCT GTTCGCGCTC
GTCTGGCGCC GGCCATCCCT CGACCTGACG CGCACGATCG ACCGCTATGT CTCGAGGCTG
CGCGCCAAGC TGGAGCTTCA TCCAGCCAAT GGCATGCGCA TCCGGGCCAT CTACAGCATG
GGGTATCGGC TCGAACTCGC GCAGGAGATG GAGTACCTGC CCCAGATCAA GGCAGCCGCC
TGA
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| Protein sequence | MLIAVVHPNL EEAAWIMRTL RTEGYSAAHY ADTREFLRSI KRDSHDLVLI SHAASHLALS
KLPMLIRSRL QQHTPLLLVG HDHDEDAVAA SLGAGADGYI ALPISPALFS ARVTALLRRI
YPIRAARQTF MVGPYELNQR EYRIKLHGAD IPLSHTEARL AIFLFCNVGR VLSRSHLFAL
VWRRPSLDLT RTIDRYVSRL RAKLELHPAN GMRIRAIYSM GYRLELAQEM EYLPQIKAAA
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