| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1889 |
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| Symbol | iorB2 |
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| ID | 1220728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2074034 |
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| End bp | 2076331 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637238282 |
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| Product | transmembrane isoquinoline 1-oxidoreductase subunit beta oxidoreductase protein |
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| Protein accession | NP_520010 |
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| Protein GI | 17546608 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0091612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.778364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCG ACGCAACCGC ACCGCGCCGC GGACGGCGCC GCTTCCTGCT GGGCGCGCTC
GGCATCGGCG GGGCGCTGGT AGTGGGCTGG GGCGTGCTGC CGCCGCGCAG CCGCCTGGGC
GACGCGGCGG ACTTTCCCGC GCAGCCCGGC GAGGTGGCGC TCAACGGGTG GATCAAGATC
ACGCCGCAGG GCGATGTCGT GCTCGCCATG CCGCGCGTGG AGATGGGGCA GGGCATCCAC
ACCGCGCTGT CGATGCTGGC GGCGGAGGAG CTCGATATCC CGCTCGCGCG GGTCCGCGTG
GAGAGCGCGC CCATCGAGCG CATCTACGGC AACGTCGTCA GCGTGGTCGA CAGTGCGCTG
CCGCTGCATC CGGACGATGC CGGCAAGGCT TGGGCCCGCG CGCTGCACTG GATCATGGCC
AAGAGCGCCC GCGAGATCGG GCTGGTCATC ACCGGCGGCA GCAGCAGCGT GGCGGATGCC
TGGCAACCGG TGCGCGAGGC GGCGGCCACC GCGCGCGCCA CGCTGGTGGA GGCCGCGGCG
CGCGCGTGGA ACGTGCAGGC CGCGCAGGTG AGCGTGCATG ACGGCCGGCT GATCGGCCCG
GGCGGCCGGC AGGCCGGCTT CGGCGAGGTG GCGGCGCACG CGCGCGACAT CGCGCCGCCC
GCGAGCGTCA CGCTCAAGCC CGCGTCGCAA TACCGGCTGG TCGGCCAGCC GGTGCCGCGC
AGCGATGTGG CGGGCAAGAC CGACGGCAGC GCGCGCTTTG CCATCGACGT CCGGCCGCCC
GGCCTGCTGT ACGCGGCGGT GGCGATGTGT CCGGTGTTCG GCGGCAGGCT CAAGGCCTTC
GATGCGAAGG CGGCGCAGGG CATGCCCGGC GTGCGCTACG TGGTGCCGTT CGATGGCGCG
GCGGGCGGCG CGCCCGGCGT GGCGGTCGTC GCCGACCACT ACTGGCAGGC GCGCCAGGCC
GTGGCGAAGC TCGACCCGGT GTGGGACAGC GGGCCGCATG CCGCGCTCGA TTCCGCCGGC
ATCCGACGGC AGATCGCCGC CGCGCTCGAC AGCGACCGGG GCGGCTTCAC CTACCGGTCG
ACGGGCGATG GCCTGCAGGC GTTCGACCAC GTGGGCGGCG CGACGGTGGT CGAGGCCGAA
TACAGCGTGC CGTATCTCGC GCATGCGGCG ATGGAGCCGA TCAACTGCAC GGCGCAGGTG
ACCCGGGACC ACGTGCAGCT GTGGGCGCCG ACGCAGGTCG CCACGCTGGC GCAACTGGTC
GCGGCGCGCG CGGCGGGCGT GCGCAGCGAG CAGGTGCGGA TCGAGGTGCC GCTGATCGGC
GGCGGCTTCG GGCGCCGGCT CGAATCGGAC TTCGTCGGCC AGGCGGTGGC GATCGCGGTC
CGGACCGAAG GCCGGCCGGT GCAGGTGATC TGGACCCGCG AAGACGACAT CCGCCACGAT
TTCTACCGCC CGCAGGCCAT CGCCCGGCTG AAGGCGCGCA TCGAGCGCGG CCGGGTGACG
GCGCTGGCCT CGCGCAGCGC CGGCCAATCC ATCCTGGCCG GCGAGCTCGG CCGGCTGTTC
GGCGCGCCGT CGCTCGGCAT CGACCGCTAT ACGGCGGAGG GGCTGTTCGA CCTGCCGTAC
GAGATCGCGC ACGAGCACAT CGCCCACCTG GCGGTCGACC TGCCGGTGCC GGTGGGATTC
TGGCGCAGCG TCGGCCACTC CTACACGGCG TTCTTCCTGG AAGGCTTTCT CAACGAGGTG
GCGGCGGCGG CCGGGCTGGA TCCGCTCGCG ATGCGGCGCG ACTTGCTCGA GGCGCATCCG
CGCGAGCGCA CGGTGCTCGA CACGGCGGCG CGGGCGGCGG GCTGGGGCCA GCCGCTGGCG
CAGGCCGCCG ATGGGGCGCC GCGGGCGCGC GGGCTGGCGC TGCACGGCTG CTTCGGCTCG
GTGGTGGCGC AGGTGGCGGA GGTCTCGCTC AAGGACGGCA AGCCCCGTGT CCATCGCGTG
GTGTGCGCGG TGGACTGCGG CACGGTCGTC AACCCGGGCA TCGTCGCGCG GCAGGTGGAG
AGCGCGGTCA TCTTCGGCCT GGGGGCGGCT CTCCATGGGC AGATCCAGGT CAAGGACGGG
CAGGTCGTGC AGTCCAACTA TTCCGATTAC CCCGTGCTCG GGATGGCCGA CACGCCGGTC
ATCGAAACCC ATCTCGTGCC CAGCGCGGCC GAGCCCGGCG GGGTGGGCGA GATCGCGGTG
CCGCCGATCG CGCCGGCGGT GGCGCACGCC GTGGCGCAGC TCACCGGCAA GCCGGTGCGG
CAGCTGCCGA TGGCGTGA
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| Protein sequence | MTADATAPRR GRRRFLLGAL GIGGALVVGW GVLPPRSRLG DAADFPAQPG EVALNGWIKI
TPQGDVVLAM PRVEMGQGIH TALSMLAAEE LDIPLARVRV ESAPIERIYG NVVSVVDSAL
PLHPDDAGKA WARALHWIMA KSAREIGLVI TGGSSSVADA WQPVREAAAT ARATLVEAAA
RAWNVQAAQV SVHDGRLIGP GGRQAGFGEV AAHARDIAPP ASVTLKPASQ YRLVGQPVPR
SDVAGKTDGS ARFAIDVRPP GLLYAAVAMC PVFGGRLKAF DAKAAQGMPG VRYVVPFDGA
AGGAPGVAVV ADHYWQARQA VAKLDPVWDS GPHAALDSAG IRRQIAAALD SDRGGFTYRS
TGDGLQAFDH VGGATVVEAE YSVPYLAHAA MEPINCTAQV TRDHVQLWAP TQVATLAQLV
AARAAGVRSE QVRIEVPLIG GGFGRRLESD FVGQAVAIAV RTEGRPVQVI WTREDDIRHD
FYRPQAIARL KARIERGRVT ALASRSAGQS ILAGELGRLF GAPSLGIDRY TAEGLFDLPY
EIAHEHIAHL AVDLPVPVGF WRSVGHSYTA FFLEGFLNEV AAAAGLDPLA MRRDLLEAHP
RERTVLDTAA RAAGWGQPLA QAADGAPRAR GLALHGCFGS VVAQVAEVSL KDGKPRVHRV
VCAVDCGTVV NPGIVARQVE SAVIFGLGAA LHGQIQVKDG QVVQSNYSDY PVLGMADTPV
IETHLVPSAA EPGGVGEIAV PPIAPAVAHA VAQLTGKPVR QLPMA
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