Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1873 |
Symbol | purU |
ID | 1220712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2057091 |
End bp | 2057957 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637238266 |
Product | formyltetrahydrofolate deformylase |
Protein accession | NP_519994 |
Protein GI | 17546592 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00824927 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACT CCGGTTTCAT TCTCACGCTG TCCTGTCCGG ACCAGCCCGG CATCGTCCAC GCCGTGTCCG GCCTGCTGTT CGAGCAGGGC TGCAACATCC TCGACTCCGA CCAGTTCGGC GACGAGTTCA CGGGCCGCTT CTTCATGCGG GTGCATTTCG TGCCGCAGGG CCAGCCGCTG GACCTGCAGG CGCTGCGCGA GCGCTTCGCG CCCATCGGCG AGCGCTTCTC GATGCAGTGG GGCATGTTCG ATGCCGCGGT CAAGCCGCGC GTGATGATCC TGGTCTCGAA GATCGGCCAT TGCCTGAACG ATCTGCTGTT CCGCGCGCGC GCCGGCCAGT TGCCGATCGA GATCGCGGCC ATCGTCTCCA ACCACCGCGA TTTCTACCAA CTGGCTGCTT CCTACGACGT GCCGTTCCTG CATCTGCCGC TGCTCAAGGG TACCGATGCG CAGAAGGCCC AGCAGGAAGC ACGCATCCGG GAAATCATCG AAGAGCAGCG GATCGACCTG GTCGTGCTCG CGCGCTACAT GCAGATCCTG TCGGACGACC TGTGCCGCCA GCTCGAAGGC CGCGCCATCA ACATCCACCA CTCGTTCCTG CCGAGCTTCA AGGGCGCCAA GCCTTACTAC CAGGCGCACG AGCGGGGCGT GAAGCTGATT GGCGCGACGG CGCACTATGT CACGGCCGAA CTGGACGAGG GCCCCATCAT CGAGCAGGAG ATCGAGCGGG TGGACCACAG CATGGACCCC GAGCAGCTCA CCGCCGTGGG CCGCGACGTG GAGTGCGTGG CGCTGGCCCG CGCCGTGAAG TGGCACGCCG AGCACCGAAT CCTGCTGAAC GGCCACAAGA CCGTCGTCTT CAAGTAA
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Protein sequence | MSHSGFILTL SCPDQPGIVH AVSGLLFEQG CNILDSDQFG DEFTGRFFMR VHFVPQGQPL DLQALRERFA PIGERFSMQW GMFDAAVKPR VMILVSKIGH CLNDLLFRAR AGQLPIEIAA IVSNHRDFYQ LAASYDVPFL HLPLLKGTDA QKAQQEARIR EIIEEQRIDL VVLARYMQIL SDDLCRQLEG RAINIHHSFL PSFKGAKPYY QAHERGVKLI GATAHYVTAE LDEGPIIEQE IERVDHSMDP EQLTAVGRDV ECVALARAVK WHAEHRILLN GHKTVVFK
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