| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1850 |
|---|
| Symbol | |
|---|
| ID | 1220688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2032886 |
|---|
| End bp | 2033380 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637238242 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519971 |
|---|
| Protein GI | 17546569 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3038] Cytochrome B561 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0857051 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCCA TACGCCCCAT GGACCCCAAC TTTCCCATCC AGCGCCAGGT TGAGCTGGAT
GCTTCCCCCG TCGTGCTGGT CAACCTGTTC CTTCTGGACA AGGCCGACGA AGAAGCCTTC
CTGCGTGTCT GGCAAGACGA CGCGAACTTC ATGAAGCGGC AGCCGGGGTT CATCTCAACC
CAACTGCACC GCGCCATCGG CGACAGCCCG GCATACCTCA ACTACGCGGT CTGGGAATCG
AATGCGCATT TCCGGGCGGC GTTCATGCAT CCGGAGTTCC GCGCGAAGCT CTCGGATTAC
CCGTCCTCGG CGGTCGCGTC GCCGCACCTG TTCGGCGCAG CGTTGCCGGA TTTCCATGCG
TTTGCGCCAC GGGTGCTGCA CGGTATCGGG GCTCGCCTCT TGTTGCTGAT GGCGCTGGTG
CATGCCGGCG CCGCGCTTTA TCACCACTTC ATTCGCCGGG ACGGCCTGCT CCGGCGCATG
TGGTTCGGCA AATGA
|
|---|
| Protein sequence | MHAIRPMDPN FPIQRQVELD ASPVVLVNLF LLDKADEEAF LRVWQDDANF MKRQPGFIST
QLHRAIGDSP AYLNYAVWES NAHFRAAFMH PEFRAKLSDY PSSAVASPHL FGAALPDFHA
FAPRVLHGIG ARLLLLMALV HAGAALYHHF IRRDGLLRRM WFGK
|
|---|
| |