Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1820 |
Symbol | |
ID | 1220658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1989576 |
End bp | 1990199 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238212 |
Product | hypothetical protein |
Protein accession | NP_519941 |
Protein GI | 17546539 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGCACTG ACGACGTTTT CAGCTACCCG ATACAGGCCG GTCACGGCCT GCCGCATGAC CCCATTCCCG CGATTCTCGG GCCGCGGCCG ATCGGCTGGA TTTCCACGCG CGATGCCGAG GGCCGGCTCA ATCTGGCGCC GTACAGCTTC TTCAATATCT TCAACTACAA GCCGCCGCTG GTCGCGTTCT CGAGCGTCGG CAAGAAGGAC AGCGTGCGCA ATGCCGAAGC GACCGGCGAG TTCGTCTACA ACCTCGCGAC GCGCCCGCTG GCGGAGCAGG TCAACCAGAC CAGCATCGAC GCGCCGCCGG GTATCGACGA GTTCGCGCTG GCCGGCCTGA CGCCCGCGCG CTGCATCGAG GTGGCCGCGC CGCGCGTGGC GCAGAGCCCG GTCTCGCTCG AGTGCAAGGT GACGCAGGTG CAGCAGCTGG CCGGCATCGA CGGGGTGGCG CTGAATACGT GGATGGTCTT CGGCGAAGTC GTCGCGGTGC ACATCGACCG CGCGCTGCTG CGGGACGGCA TCTACGACAC CGCCGCGGCC CAGCCGATTC TGCGCGCCGG CGGGCCCGCC GACTACTTCG AGGTCTTGCC GCAGGGACGC TTCAGGATGT ACCGGCCGAG ATAG
|
Protein sequence | MCTDDVFSYP IQAGHGLPHD PIPAILGPRP IGWISTRDAE GRLNLAPYSF FNIFNYKPPL VAFSSVGKKD SVRNAEATGE FVYNLATRPL AEQVNQTSID APPGIDEFAL AGLTPARCIE VAAPRVAQSP VSLECKVTQV QQLAGIDGVA LNTWMVFGEV VAVHIDRALL RDGIYDTAAA QPILRAGGPA DYFEVLPQGR FRMYRPR
|
| |