| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1798 |
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| Symbol | |
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| ID | 1220636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1933916 |
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| End bp | 1934896 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637238190 |
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| Product | putative pyruvate decarboxylase E1 (Beta subunit) oxidoreductase protein |
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| Protein accession | NP_519919 |
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| Protein GI | 17546517 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.044195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACG TCAACCTGGT CGAGGCGGTC AACCTGGCGC TCGCGCATGC GCTGGAGCAT
GACCCGTCAG TGGTGCTGCT GGGCGAGGAC ATCGGGGTCA ACGGCGGGGT GTTCCGCGCC
ACGGTCGGGC TGCAGGCACG CTTCGGCGCC GAGCGCGTCA TCGATACGCC GCTGGCCGAG
ACCGCGCTGG CCGGCGCCGC CATCGGCATG GCGGCGATGG GGCTGCGGCC GGTGGTCGAG
ATCCAGTTCA GCGGCTTCAT CTATCCGGCC ATCGACCACG TGCTCAATCA CGCGGCCCGG
CTGCGGCATC GCACGCGCGG GCGGCTGTCG TGCCCGCTGG TGATCCGCTC GCCGTGCGGG
GCCGGCATCC ACGCGCCGGA GCACCATTCG GAGAGCCCGG AGGCGCTGTT CGCGCACATG
CCGGGGCTGC GGGTGGTGAT TCCGTCGTCG CCGGCGCGGG CGTACGGGCT GCTGCTGGCG
GCCATCCGCG ATCCGGACCC GGTGATCGTC TTCGAGCCGA CGCGCCTGTA CCGCGTGTTC
CGCCAGCCGG TGGAGGACAA CGGCGAGGCG CTGCCGCTGG ACACCTGCTT CACCCTGCGC
GACGGCACCG ACGTGACGCT GGTGAGCTGG GGCGGAGCAT TGCAGGCCGC GCAGGCCGCC
GCCGACCAGC TCGCGCAGGA CGGCGTGCTG GCCGAGGTGA TCGACGTGGC CACGCTCAAG
CCGCTCGACA TGGAAACCAT CCTGGCCTCG GTGGCCAAGA CCGGGCGCTG CGTGATCGTG
CACGAGGCGC CGCGCACGTC GGGCTTCGGT GCGGAGATCG CCGCCAACCT GGCCGAGCAC
GGGCTGTATT CGCTGCTGGC GCCTGTACAG CGGGTGACGG GCTACGACGT GGTCATGCCG
CTGCCCAGGC TGGAGAACCA ATACCTGCCC GGCGTCGAGC GCATCCTCGC CGCGGTCAGG
AAGACCCTGG AGGCCGCCTG A
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| Protein sequence | MADVNLVEAV NLALAHALEH DPSVVLLGED IGVNGGVFRA TVGLQARFGA ERVIDTPLAE
TALAGAAIGM AAMGLRPVVE IQFSGFIYPA IDHVLNHAAR LRHRTRGRLS CPLVIRSPCG
AGIHAPEHHS ESPEALFAHM PGLRVVIPSS PARAYGLLLA AIRDPDPVIV FEPTRLYRVF
RQPVEDNGEA LPLDTCFTLR DGTDVTLVSW GGALQAAQAA ADQLAQDGVL AEVIDVATLK
PLDMETILAS VAKTGRCVIV HEAPRTSGFG AEIAANLAEH GLYSLLAPVQ RVTGYDVVMP
LPRLENQYLP GVERILAAVR KTLEAA
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