| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1797 |
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| Symbol | |
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| ID | 1220635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1932832 |
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| End bp | 1933923 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637238189 |
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| Product | pyruvate dehydrogenase E1 component alpha subunit oxidoreductase protein |
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| Protein accession | NP_519918 |
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| Protein GI | 17546516 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0478854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGG TCGGCAGCTT TCAGATCGAC TACACGCAGT ACCTTGACCC CGAGGGCCAG
CCGGTCCAGC CATTGCCGGC GTTTGCGCAA GACGTGCCGA CCCTGCTCGC GCTGTATCGC
GCCATGGTGC TGACGCGCGC GTTCGACACC AAGGCCATCG CGCTGCAGCG CACCGGCAAG
CTCGGCACCT TTGCCTCGTC GGTCGGCCAG GAGGCGATCG GCGTGGGCGT GGCCAGCGCC
ATGCGGGCCG AAGACGTCCT GTTCCCGTCC TACCGCGACC ACAGCGCGCA GTTGCTGCGC
GGCGTCAGCA TGGCCGAGAG CCTGCTGTAC TGGGGCGGCG ACGAGCGCGG CAGCTGCTTT
GCTGCGGTGC GCGAAGATTT CCCGAACTGC GTGCCGATCG GCACCCAGGT CTGCCACGCG
GCGGGGGCCG CCTACGCGTT CCAGCTGCGC CGCGAGCCGC GTGTCGCCGT CGCGGTGTTC
GGTGACGGCG GCACCTCCAA GGGCGATTTC TATGAAGGGA TGAACCTGGC CGGCGTGTGG
GGCGCGCCGC TGGTGCTCAT CGTCAACAAC AACCAGTGGG CGATCTCGGT GCCGCGCAGC
CGCCAGACCG CCGCGCAGAC CCTGGCCCAG AAGGCGATCG CCGCGGGTAT CGCCGGGCGG
CAGGTGGACG GCAACGACGT GATCGCCGTG CGGCAGGCCG CGCAGGACGC CCTCGACAAG
GCCCGCTCGG GCGGCGGCCC GACGCTGATC GAAGCGCTCA GCTACCGGCT GGGCGACCAC
ACCACGGCGG ACGACGCCAC GCGCTACCGC GATCCGGACA GCGTCAAGCA GGCCTGGGCC
CGCGAGCCGA TCCTGCGCTT GCGCAACTAC CTGATGCGCC TGAGTGCCTG GGACAAGGCC
CAGGAAGAGC AGCTCGGCCG CGCCTGCTAT GCCCAGGTGG AGGAGGCGGT GGCGGCGTAC
CTGGCGGTCG GGCAGCCCGG CCCCTCGGCG ATGTTCGACC ACCTGTATGC CGCCTTGCCG
CGCGCGCTGG AGGCGCAGCG CGCCATGGCG CTGGCCTTTG CGCCGCAGGG CGGGGAGGGC
GGCCATGGCT GA
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| Protein sequence | MSTVGSFQID YTQYLDPEGQ PVQPLPAFAQ DVPTLLALYR AMVLTRAFDT KAIALQRTGK
LGTFASSVGQ EAIGVGVASA MRAEDVLFPS YRDHSAQLLR GVSMAESLLY WGGDERGSCF
AAVREDFPNC VPIGTQVCHA AGAAYAFQLR REPRVAVAVF GDGGTSKGDF YEGMNLAGVW
GAPLVLIVNN NQWAISVPRS RQTAAQTLAQ KAIAAGIAGR QVDGNDVIAV RQAAQDALDK
ARSGGGPTLI EALSYRLGDH TTADDATRYR DPDSVKQAWA REPILRLRNY LMRLSAWDKA
QEEQLGRACY AQVEEAVAAY LAVGQPGPSA MFDHLYAALP RALEAQRAMA LAFAPQGGEG
GHG
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