Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1770 |
Symbol | |
ID | 1220608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1897129 |
End bp | 1898064 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238162 |
Product | hydrolase protein |
Protein accession | NP_519891 |
Protein GI | 17546489 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.513437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.200622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTG CCACCGCCAC CCCCGTTGCC GCAATCACGC ATCCGCAGTT CGCCGACCTG CCCAACGGCA CGCGGCTGCA TTACGCCAGC GCCGGCCGGC GCGGCGCGCC GCTGATGCTG TTCGTGCACG GCTTTCCGGA GTTCTGGTAC GCGTGGGAGG CGCAGCTCGC GGCGTTCGGC GACACGCACT TTGCGGTGGC GCCGGACATG CGCGGCTACA ACCTGTCGAG CAAGCCCGCA GAGGTGGATG CCTACCGGCC CAAGCCGCTG GTGCAGGACC TGGAGCAGTT CATCACCGCA CTGGGCTATG ACAGCGCCAT CGTGGTCGCG CACGATTGGG GCGGGGCGAT CTGCTGGAAC CTGGCGATCC AGCATCCCGA GCGCGTGGCG CGGCTGGTGA TCGTCAATTC ACCGCATCCG TGGGTGTTCG CCAACGCGCT GCTGAGCGAC CCGGCGCAGC AGGCCGCGTC GGCCTATATG AACTGGCTGC GCCAGCCGGG GGTGGAGGAC GTGCTGGCCG CCGACGGCTT CGACAAGCTC GAAGGCTTTT TCAATGGCAT GGGCCAGCCG GTGGCCGAGT GGTTCACCCC CGACGTGCGC GCGCGCTACC ACGCCGCCTG GAGCCGGCCG GGCGAGGGCG GCTCGCACGG GCTGACCGGC GGGATCAACT ACTACCGGGC TTCGCCGCTG CACCCGCCCG CCGAAGGCCA GGCACCGGTG CGCATCGACC AGATGCCGCC CGAAGCCTTT GTCGTGAAGG TGCCGACGCT CGTGATCTGG GGCGAGAAGG ACATGGCGCT GCCGGCCGCG CTCCTCAACG GGCTGGAGCG CTTCATTCCC GACCTGCGCA TCGAGCGCAT TCCCAACGGC ACGCACTGGG TGGTGCATGA GCAGCCGGAG CGCATCACGG CGCTGATCCG GCCGTTCGTG GAATAG
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Protein sequence | MTAATATPVA AITHPQFADL PNGTRLHYAS AGRRGAPLML FVHGFPEFWY AWEAQLAAFG DTHFAVAPDM RGYNLSSKPA EVDAYRPKPL VQDLEQFITA LGYDSAIVVA HDWGGAICWN LAIQHPERVA RLVIVNSPHP WVFANALLSD PAQQAASAYM NWLRQPGVED VLAADGFDKL EGFFNGMGQP VAEWFTPDVR ARYHAAWSRP GEGGSHGLTG GINYYRASPL HPPAEGQAPV RIDQMPPEAF VVKVPTLVIW GEKDMALPAA LLNGLERFIP DLRIERIPNG THWVVHEQPE RITALIRPFV E
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