| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1749 |
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| Symbol | alkK |
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| ID | 1220587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1870828 |
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| End bp | 1872456 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238141 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | NP_519870 |
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| Protein GI | 17546468 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0360029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.897782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACACA TGATGAGCGC GCCCTTGCTC ATCTCGACCA TCATCGAACA TGCCGCGCGG
AACTACGGTT CGACCGAAGT CGTGTCGCGC CGCGTGGAGG GCGATGGGGG CGAGCTCCAT
CGCACCACGT ACGCGGCCGT GCGCGATCGC GCCAAGCAAC TGGCGAATGC GCTGGCCGCG
CTCGGCGTGC AGCCCGGCGA GCGCATCGGC ACGCTGGCCT GGAACGGCTA CCGGCACCTG
GAGATCTACT ACGGCGTGTC GGGCTCGGGC GCGGTGTGCC ACACCATCAA TCCGCGCCTG
TTCCCCGACC AGGTCGCCTA CATCGTCAAC CACGCCGATG ATCAGTACGT CTTCTTCGAC
CTGACCTTCG TGCCGCTGGT CGAGGGCCTC GCGCCGCATT GCCCGAACGT CAAGGGCTGG
GTGGCGATGA CCGACCGCGC GCACATGCCG GCCTCCAGCG TGCCGATGCT GTGCTACGAA
GACCTGCTGG CCGCGCAGCG CGCCGAGTAC ACCTGGCCGC TGTTCGACGA GAACACCGCC
TCCAGCCTGT GCTACACGTC GGGCACGACC GGCAATCCGA AGGGGGCGCT GTATTCGCAC
CGCTCCACCG TGCTGCATTC GTATGGGTCG GCGCTGCCCG ATGCGCTGGG CTGCTCGGCG
CAGGACGTGA TCCTGCCGGT GGTGCCGATG TTCCACGTCA ATGCCTGGGG CCTGCCGTAT
TCGGTGCCGC TGGTGGGCGC CAAGCTGGTG TTTCCGGGGC CGAAGCTGGA CGGCGCCTCG
CTGTACGAAC TGTTCGAGCA GGAGCAGGTG AGCTTCTCCG CCGGCGTGCC GACGGTGTGG
CTCGGCCTGC TGCAGCACGT GCAGGGCAAG GGCCTGAAGT TTTCGTCGTT CCGCCGTACG
GTGATCGGCG GCTCGGCGTG CCCGCCGGCC ATGATCCGCA CGCTCAATGC GCTCGGCGTG
GAGGTGATCC ACGCCTGGGG CATGACCGAG ATGTCGCCGC TGGGCACCAC CTGCAAGCTG
ATGAGCAAGC ACAATGGCCT GCCGGACGAA ACCCGGCAGC AGGTGCTCGA GCGCCAGGGC
CGCGCCATCT ACGGCGTGGA GATGAAGATC GTCGACGGCA ACGGCCACGA GCTGCCGTGG
GACGGCAAGG CCTTCGGCGA CCTGCACGTG CGCGGGCCGT GGACCATCGC CAGCTACTAC
CGCAACGGCC AGTCGCCGCT GGTCGACGGC TGGTTCCCGA CCGGCGACGT CGCCAACATC
GACCCCGACG GCTACATGCA GATCACCGAT CGCAGCAAGG ACGTGATCAA GTCGGGCGGG
GAGTGGATCT CATCGATCGA CGTGGAGAAC GTGGCCGCCG CGCACCCGGC CGTGCACATG
GCGGCGTGCA TCGCCTGCCG GCATCCGAAG TGGGACGAGC GCCCGCTGCT GGTGGTGATG
AAGAAACCGG GCGCGGAGCT GACGCGCGAC GAAATGCTGC GCTACTTCGA GGGCAAGGTC
GCCAAGTGGT GGATTCCGGA CGACGTGGTG TTCGTCACCG AGATCCCGCT CACGGCCACC
GGCAAGATGC AGAAGCTCAA GCTGCGCGAG CAGTTCCGCG ACTACCAGTT GCCGCTCGCG
CAGGCTTAG
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| Protein sequence | MGHMMSAPLL ISTIIEHAAR NYGSTEVVSR RVEGDGGELH RTTYAAVRDR AKQLANALAA
LGVQPGERIG TLAWNGYRHL EIYYGVSGSG AVCHTINPRL FPDQVAYIVN HADDQYVFFD
LTFVPLVEGL APHCPNVKGW VAMTDRAHMP ASSVPMLCYE DLLAAQRAEY TWPLFDENTA
SSLCYTSGTT GNPKGALYSH RSTVLHSYGS ALPDALGCSA QDVILPVVPM FHVNAWGLPY
SVPLVGAKLV FPGPKLDGAS LYELFEQEQV SFSAGVPTVW LGLLQHVQGK GLKFSSFRRT
VIGGSACPPA MIRTLNALGV EVIHAWGMTE MSPLGTTCKL MSKHNGLPDE TRQQVLERQG
RAIYGVEMKI VDGNGHELPW DGKAFGDLHV RGPWTIASYY RNGQSPLVDG WFPTGDVANI
DPDGYMQITD RSKDVIKSGG EWISSIDVEN VAAAHPAVHM AACIACRHPK WDERPLLVVM
KKPGAELTRD EMLRYFEGKV AKWWIPDDVV FVTEIPLTAT GKMQKLKLRE QFRDYQLPLA
QA
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