Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1747 |
Symbol | |
ID | 1220585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1868416 |
End bp | 1868802 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637238139 |
Product | methionine sulfoxide reductase B |
Protein accession | NP_519868 |
Protein GI | 17546466 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0864529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCG AGAAAACCGA CGCCGAATGG CGCGACCAGC TCTCCGACAT CGAATACCGC GTGACCCGCG AGGCCGCCAC CGAGCGCCCC TTCACCGGCC GCTACTGGGA CCACTGGGCG CGCGGCATCT ATCACTGCGT CTGCTGCGGC ACGCCGCTCT TCGAATCGTC GACCAAGTTC GACGCCGGCT GCGGCTGGCC GAGCTATTTC GCCCCCATCA ACGGCGAGGT CATCGCCGAG AAGACCGACC ATTCGCACGG CATGGTGCGC ATCGAAGTGC AGTGCAAGCA GTGCGGCGCG CACCTGGGCC ACGTCTTCGA AGACGGCCCC GCGCCGACCG GCCTGCGGTA TTGCATCAAC TCGGCTGCGC TAAAATTCGG CGATTGA
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Protein sequence | MTIEKTDAEW RDQLSDIEYR VTREAATERP FTGRYWDHWA RGIYHCVCCG TPLFESSTKF DAGCGWPSYF APINGEVIAE KTDHSHGMVR IEVQCKQCGA HLGHVFEDGP APTGLRYCIN SAALKFGD
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