Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1735 |
Symbol | |
ID | 1220573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1856942 |
End bp | 1858357 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637238127 |
Product | two-component transmembrane sensor kinase transcription regulator protein |
Protein accession | NP_519856 |
Protein GI | 17546454 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.143515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCC CCAGCCTGCG CCGGCAACTG CTGCTGTGGC TGCTGCTGCC GTTGCTGGGC CTGCTGGCGC TCGATGCCTG GCTGACCTAC GGCCGCGCCA TGGCCGCCGC CCACCACGCC TTCGACCGCA CGCTGCAGGG CTCGCTCAAG GCCATGCGCG AAGGCATCCG GCTGCGCGAC GGGCAGTTCG CCATCAACCT GCCCTACCTG GCCCTGGAGA TCTTCGAATC GGAGGCGGGC AGCAGCATCT TCTACCGCAT CCTCGACGCG CGCGGCACCA CCCTGACCGG CTACGACGAA CTGCCCCTGC CGCCCACCCG GCCGCCCGAG CCCTACCGCA CGGCGTTCTA CGATGCCGTG CTGCGCGACA TGCGGGTCCG GGTGGCGGCA CAGCGGCTGC CGGTGCGCGA CGCCGCCTCC GCGCAGATTC AGGTGGTGTG GGTGCTGGTG GGCGAGTCGG TCGAGCCGCG CGAAGCCCTG GCGCACGACA TGCTGACGGG CTCGCTGCTG CAGGAGGGGC TGCTGGTGCT GCTGGCGCTC GGCATCGTCT GGCTGGGCGT GCGGCGAGGC CTGCGGCCGC TGCGCCAGCT CAGCGCCAGC GTGGCCGCGC GCCATGCCGA CGAGCTCGCC CCGCTGCCGC AGCACGGCCT GCCGGCCGAG GTGACCCCGC TGGTGGCCGC CATCAACCAG TATGTGGCGC GGCTGCTGCG CATGCTCGAC GCCCGCAAGC GTTTCTTCGC CGATGCGGCG CATCAGCTCA AGACGCCGCT GGCCGTGATC CAGGCCCAAT CGGAGCTGGC GCTGCGCGAG CCCGACGGCA ACCGCATCCG CCGCCACCTC GCGCCGCTGC ACGACACGGT GCGGCAGGCG GCCAAGGGCG TGCAGCAGCT GCTGTCGCTG TCGCGGCTGG AGCCGGACAG CGGCTATGCC CCGTCGCTGC AGCCGCTGCG GCTCGACACG CTGGCCGGCG AGGTGGCGCT GGAGCTGGCG CCGGTGGCGC ACCGCGCCGG CATCGACCTC GGCTTCGAGG GCGAGCCCGT GACAGTCGCG GCCGAACCGC AATGGCTGCA GGAACTGGTG GGCAATCTGC TCGACAACGC GATCCGCTAT GCCGGCCCCG ACGCGCGCGT GACGCTGCGG GTCGCGCGGC AGGCGGCGCC CGGCCAGGAC ACCGGCGCGC TGCTGCAGGT GGAAGACAAC GGCCCCGGCA TCGCCGAGGC GGAGCGCGCC GCCGTCTTCG GCCGCTTCTA CCGTGGCAGC ACCGCCCAGG CCCAGGAAGG CAGCGGGCTG GGCCTGGCCA TCGTGCGCGA AATCGCCCGC GTGCACGGCG CCACCGTCGC GCTGTCGGAC ACCGCGGGCG GCGGCCTGAC CGTCAGCGTG CGCTTCACCC AGGCCGACCG CGCGCCAGCC GGCTGA
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Protein sequence | MSAPSLRRQL LLWLLLPLLG LLALDAWLTY GRAMAAAHHA FDRTLQGSLK AMREGIRLRD GQFAINLPYL ALEIFESEAG SSIFYRILDA RGTTLTGYDE LPLPPTRPPE PYRTAFYDAV LRDMRVRVAA QRLPVRDAAS AQIQVVWVLV GESVEPREAL AHDMLTGSLL QEGLLVLLAL GIVWLGVRRG LRPLRQLSAS VAARHADELA PLPQHGLPAE VTPLVAAINQ YVARLLRMLD ARKRFFADAA HQLKTPLAVI QAQSELALRE PDGNRIRRHL APLHDTVRQA AKGVQQLLSL SRLEPDSGYA PSLQPLRLDT LAGEVALELA PVAHRAGIDL GFEGEPVTVA AEPQWLQELV GNLLDNAIRY AGPDARVTLR VARQAAPGQD TGALLQVEDN GPGIAEAERA AVFGRFYRGS TAQAQEGSGL GLAIVREIAR VHGATVALSD TAGGGLTVSV RFTQADRAPA G
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