| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1636 |
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| Symbol | rimO |
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| ID | 1220471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1757469 |
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| End bp | 1758830 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238025 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | NP_519757 |
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| Protein GI | 17546355 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.413832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACG TCAGTACCCA GAGCCCCAAG GTGGGGTTCG TCAGCCTCGG TTGTCCCAAA
GCCCTCGTGG ATTCCGAGCA GATCATCACC CAGCTGCGCG CCGAGGGGTA CGAGATTTCC
GGCACCTATG GCGGGGCCGA CCTGGTGGTC GTGAACACCT GCGGTTTCAT CGATGAGGCC
GTGCAGGAAA GCCTGGACGC CATCGGCGAG GCGCTGGCCG AGAACGGCAA GGTGATCGTC
ACCGGCTGCC TGGGCGCGAA GAAGGACGCC GCCGGCCAGG ACATCATCAC CAGCGTGCAT
CCCAAGGTGC TGGCCGTGAC CGGTCCGCAT GCGCTGGGCG AGGTGATGGA GGCGGTACAT
ACGCACCTGC CCAAGCCGCA CGATCCGTTC ATCGACCTGG TGCCGCCGCA GGGCATCAAG
CTCACGCCGA AGCACTACGC GTATCTGAAG ATTTCCGAAG GCTGCAATCA CCGCTGCAGC
TTCTGCATCA TCCCGTCGAT GCGCGGCGAC CTGGTCTCGC GCCCGGTGGC CGAAGTGATG
CTGGAGGCGG AGAACCTGCT GAAGGCCGGC GTGAAGGAGC TGCTGGTAAT CTCGCAGGAC
ACCAGCGCCT ACGGCGTCGA CGTCAAGTTC CGTACCGGCT TCTGGAACGG CCGGCCGCTC
AAGACGCGCA TGACCGAACT GGTCGGCGCG CTGGGCGAAC TGGCGGCCCA GTATGGCGCC
TGGGTGCGCC TGCATTACGT CTACCCGTAT CCGAGCGTGG ACGAGGTGAT GCCGCTGATG
GCCGAGGGCA AGGTGCTGCC GTATCTCGAC GTGCCGCTGC AGCATGCCCA TCCGGAAGTG
CTCAAGCGCA TGAAGCGCCC GGCCAACGCG GAGAAGACGC TGGACCGCAT CCGCGCCTGG
CGCGAGGTCT GCCCGGAGCT GACCATCCGC AGCACCTTCA TCGCCGGGTT CCCGGGCGAG
ACGGAGGAAG AGTTCCAGAC GCTGCTCGAC TTCATCGCCG AGGCCGAGCT CGATCGTGTC
GGTTGCTTCG CCTACTCCCC GGTGGAGGGC GCGACCGCCA ACGATCTGCC GGGCGCGCTG
CCCGACGAGG TGCGCGAGGA GCGCCGCGCG CGCTTCATGG AAGTGGCCGA GCGCGTGTCG
GCCCGCCGCC TGCAGCGCAA AGTGGGCAAG ACGCTGCGCG TGCTGGTGGA TGAGGTCAAC
CAGGATGGCG GCATCGGCCG CTCGTCGGCG GATGCGCCGG AGATCGACGG CCTGGTCTAC
ATTGCGCCGC CGTCCAAGCC GTACAAGCGC TACAAGGCGG GCGATTTCGT GTCGGTGAAG
ATCACCGGCG CCGATGGCCA CGACCTGTGG GGCGAGGTCT GA
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| Protein sequence | MSDVSTQSPK VGFVSLGCPK ALVDSEQIIT QLRAEGYEIS GTYGGADLVV VNTCGFIDEA
VQESLDAIGE ALAENGKVIV TGCLGAKKDA AGQDIITSVH PKVLAVTGPH ALGEVMEAVH
THLPKPHDPF IDLVPPQGIK LTPKHYAYLK ISEGCNHRCS FCIIPSMRGD LVSRPVAEVM
LEAENLLKAG VKELLVISQD TSAYGVDVKF RTGFWNGRPL KTRMTELVGA LGELAAQYGA
WVRLHYVYPY PSVDEVMPLM AEGKVLPYLD VPLQHAHPEV LKRMKRPANA EKTLDRIRAW
REVCPELTIR STFIAGFPGE TEEEFQTLLD FIAEAELDRV GCFAYSPVEG ATANDLPGAL
PDEVREERRA RFMEVAERVS ARRLQRKVGK TLRVLVDEVN QDGGIGRSSA DAPEIDGLVY
IAPPSKPYKR YKAGDFVSVK ITGADGHDLW GEV
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