Gene RSc1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1626 
Symbol 
ID1220461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1745815 
End bp1747956 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content69% 
IMG OID637238015 
ProductATP-dependent DNA helicase-related protein 
Protein accessionNP_519747 
Protein GI17546345 
COG category[L] Replication, recombination and repair
[K] Transcription 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTTCGC TTTCCCCACT CGCCGAGCCG TCGGCCGATG CCGGCAATGG CGATGCCGCC 
GCGCTTCCCG ACGCGCCGCC CACCGACCTC CACCATGCCG AACTGGCGAC GCTGTTCGCC
GATGACGGCA CGCTGGCGCA GGGCATCGAG TCGTACCGGC CGCGGACATC GCAGCTGACG
ATGGCGCAGG CGGTGGCGAA TGCCATCGAG GCGGCGGATT CGCTGATCGT CGAGGCGGGT
ACCGGCACGG GCAAGACCTA CGCCTACCTC GTTCCGGCGA TGCTGTGGGG CGGCAAGGTG
ATCCTGTCCA CCGGGACCAA GAACCTGCAG GACCAGCTGT TCCTGCGCGA TATCCCGACC
GTGCGCAAGG CCCTGAATGC ACCGGTGTCG GTGGCGCTGC TGAAGGGGCG GGCCAACTAC
GTCTGCCATT ACCACCTGGA GCGCACGTCG CAGAACGGGC GGCTGTCGTC GCGGCAGGAC
GCGGCGTGGC TGCGCGAGAT CAACCGCTTC CTCAAGACCA CCAAGACGGG CGACAAGGCC
GAGCTTTCCG CCGTGCCCGA GAACGCGCCG GTGTGGAACC TGGTCACGTC CACGCGCGAC
AACTGCCTCG GTTCGGAGTG CGCGTACTAC AAGGACTGCT TCGTCATGCG CGCCCGCAAG
GAGGCGCAGC AGGCCGACAT GGTGGTCGTC AATCACCACC TGTTCTTCGC CGATGTCATG
CTCAAGGACA CCGGCATGGC CGAGCTGCTG CCGGCCGCGA ACACCGTCAT CTTCGACGAA
GCGCATCAGC TGCCCGAGAC CGCGACGCTG TTCTTCGGCG AGACGATCTC CACCAACCAG
TTGCTGGAAC TGGCGCGGGA CAGCGTGGCC GAGGGGCTGT CGCATGCGCG CGATGCGGTG
GACTGGGTGG CCATCGCCGC GCCGCTCGAG CGCGCCGCGC GCGACCTGCG CCTGGTATTC
CGCCAGGACG GCGCGCGCCT GTCGATGAAG CAGATCGATA GCGATGCGGC GCTCAGCAAG
CCGTTCTACG AAGTCCTGCC CAAGCTGGAG CAGGCGCTGT CCGATTTTAC CGGTGCGCTG
GAGGCGCAGG CCGAGCGCGC CGAGACCATC GAGCAATGCC ATCGCCGCGC GGTGGCGCTG
TGCGACAAGC TTGAGGCCTG GGCCGCCCCC AGGCCGGCGC CGGCCGCCAA GGCCGATGGC
GAGGCGGCGC TCGAGGCCGA GGCACCCGTC GATGAGCGGG TGCGCTGGGT CGAAGTCTTC
GCCAATGCCG TGCAGCTGCA CCTGACGCCG CTGTCGATCG CGCCGATCTT CTCGCGCCAG
CGGGCCGGGC AGCCGCGCGC CTGGATCTTC ACGTCGGCGA CGCTTTCCGT GCGCGGGAAT
TTCACGCACT ACGCCGCGCA GCTGGGCCTC GACCGTGACC GCTCGATGAC GCTCGACAGT
CCCTTCGACT ACGCATCGCA GGGGTTGCTG TACGTGCCGC GCGATCTGCC GCAGCCGAGC
GATCCGCGCT TCACCGATGC GGTGCTCGAC GCCGCCCTGC CGATGATCGA AGCGGCCGGC
GGCAAGACCT TCGTGCTGTG CACCACGCTG CGCGCCGTCA ACCGCGCCGC CGAGCGGCTG
ACCGACGAGT TCGCGCAGCG CGGCTGGGAT TTTCCGCTGC TGGTGCAGGG CCAGGCCAGC
CGCACGGAGC TGCTCGAGCG CTTCCGCGCG CTCGGCAACG CGGTGCTGGT CGGCAGCCAG
AGTTTCTGGG AAGGCGTGGA CGTGCGGGGC GAGGCGCTGT CGCTGGTCGT CATCGACAAG
CTGCCGTTCG CGCCGCCCGA CGATCCGGTG CTCAGTGCCC GGATGGAAGC GCTGGAAAAG
AAGGGCCTGA GCCCGTTCGC CGTCCATCAG TTGCCGCATG CCGTCATCAC GCTCAAGCAG
GGTGCGGGGC GGCTGATCCG CTCCGAGAGC GATCGCGGCG TGCTGATGAT CTGCGATCCG
CGCCTGGTGG AGAAGTCGTA TGGGCGGCAG ATCTGGCAGA GCCTGCCGCC GTTCAAGCGC
ACCCGCGAGG CGGACACGGC GGCGGGGTTC CTGCGTTCGC TGGGTCAGGC TGAATCGGCG
GCGTTTCCGG CCGACACCTC CGCGGCCGAC ACCTCCGCCT GA
 
Protein sequence
MTSLSPLAEP SADAGNGDAA ALPDAPPTDL HHAELATLFA DDGTLAQGIE SYRPRTSQLT 
MAQAVANAIE AADSLIVEAG TGTGKTYAYL VPAMLWGGKV ILSTGTKNLQ DQLFLRDIPT
VRKALNAPVS VALLKGRANY VCHYHLERTS QNGRLSSRQD AAWLREINRF LKTTKTGDKA
ELSAVPENAP VWNLVTSTRD NCLGSECAYY KDCFVMRARK EAQQADMVVV NHHLFFADVM
LKDTGMAELL PAANTVIFDE AHQLPETATL FFGETISTNQ LLELARDSVA EGLSHARDAV
DWVAIAAPLE RAARDLRLVF RQDGARLSMK QIDSDAALSK PFYEVLPKLE QALSDFTGAL
EAQAERAETI EQCHRRAVAL CDKLEAWAAP RPAPAAKADG EAALEAEAPV DERVRWVEVF
ANAVQLHLTP LSIAPIFSRQ RAGQPRAWIF TSATLSVRGN FTHYAAQLGL DRDRSMTLDS
PFDYASQGLL YVPRDLPQPS DPRFTDAVLD AALPMIEAAG GKTFVLCTTL RAVNRAAERL
TDEFAQRGWD FPLLVQGQAS RTELLERFRA LGNAVLVGSQ SFWEGVDVRG EALSLVVIDK
LPFAPPDDPV LSARMEALEK KGLSPFAVHQ LPHAVITLKQ GAGRLIRSES DRGVLMICDP
RLVEKSYGRQ IWQSLPPFKR TREADTAAGF LRSLGQAESA AFPADTSAAD TSA