Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1610 |
Symbol | |
ID | 1220443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1731106 |
End bp | 1731906 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637237997 |
Product | transcription regulator protein |
Protein accession | NP_519731 |
Protein GI | 17546329 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAG CAGACAAGGA GCCCGGCAAG ACATCCATCC AGGTCATCGA GCGCATGATG CTGCTGCTCG ATGCGCTGGC GGGGCATGCC GACCCCGTCA GCCTGAAAGC ATTGTCCGCC AGCACCGGCC TGCATCCGTC CACGGCCCAC CGCATTCTCA ACGACATGGT GGCCTGCCGC TTCGTCGATC GCTCCGACCC CGGCAGCTAT CGCCTCGGCA TGCGCCTGCT GGAGCTCGGC AACCTGGTCA AGGCACGGCT GTCCGTGCGC GAAGCCGCGC TGGCGCCGAT GCGTGCCCTG CACCGCCTCA CCGGCCAGAC CGTCAATCTA TCGGTACGCC AGGGCGACGA GATCGTCTAT ATCGAACGCG CCTACAGCGA GCGCTCGGGC ATGCAAGTGG TGCGCGCTAT CGGCGGCCGT GCGCCACTGC ATCTGACGTC GGTCGGCAAG CTGTTCCTGG CCGCGGACGA GATCGGCCGC GTGCGGGCGT ATGCCACGCG CACCGGCCTG TCCGGTCACA CCCGCACGTC GATCACCGAC CTGCCCAAGC TGGAGCGTGA ACTGAGTTGG GTCCGTACCA ACGGCTATGC GCGCGACAAC GAAGAACTGG AGCTGGGCGT GCGCTGCATC GCCGCCGGCA TCTACGACGA CTCGCGCCAC CTGGTGGCGG GGCTGTCGCT GTCGGCGCCG GCAGACCGCC TGCAAGACAG CTGGCTCGAC AACCTGAAAG ACACCGCCCT GCAGATCTCC AAGGGCATGG GATTCATCCC CGAGGAACAG CCGGTGCTGC GCGCGGAATG A
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Protein sequence | MAEADKEPGK TSIQVIERMM LLLDALAGHA DPVSLKALSA STGLHPSTAH RILNDMVACR FVDRSDPGSY RLGMRLLELG NLVKARLSVR EAALAPMRAL HRLTGQTVNL SVRQGDEIVY IERAYSERSG MQVVRAIGGR APLHLTSVGK LFLAADEIGR VRAYATRTGL SGHTRTSITD LPKLERELSW VRTNGYARDN EELELGVRCI AAGIYDDSRH LVAGLSLSAP ADRLQDSWLD NLKDTALQIS KGMGFIPEEQ PVLRAE
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