Gene RSc1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1610 
Symbol 
ID1220443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1731106 
End bp1731906 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID637237997 
Producttranscription regulator protein 
Protein accessionNP_519731 
Protein GI17546329 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAG CAGACAAGGA GCCCGGCAAG ACATCCATCC AGGTCATCGA GCGCATGATG 
CTGCTGCTCG ATGCGCTGGC GGGGCATGCC GACCCCGTCA GCCTGAAAGC ATTGTCCGCC
AGCACCGGCC TGCATCCGTC CACGGCCCAC CGCATTCTCA ACGACATGGT GGCCTGCCGC
TTCGTCGATC GCTCCGACCC CGGCAGCTAT CGCCTCGGCA TGCGCCTGCT GGAGCTCGGC
AACCTGGTCA AGGCACGGCT GTCCGTGCGC GAAGCCGCGC TGGCGCCGAT GCGTGCCCTG
CACCGCCTCA CCGGCCAGAC CGTCAATCTA TCGGTACGCC AGGGCGACGA GATCGTCTAT
ATCGAACGCG CCTACAGCGA GCGCTCGGGC ATGCAAGTGG TGCGCGCTAT CGGCGGCCGT
GCGCCACTGC ATCTGACGTC GGTCGGCAAG CTGTTCCTGG CCGCGGACGA GATCGGCCGC
GTGCGGGCGT ATGCCACGCG CACCGGCCTG TCCGGTCACA CCCGCACGTC GATCACCGAC
CTGCCCAAGC TGGAGCGTGA ACTGAGTTGG GTCCGTACCA ACGGCTATGC GCGCGACAAC
GAAGAACTGG AGCTGGGCGT GCGCTGCATC GCCGCCGGCA TCTACGACGA CTCGCGCCAC
CTGGTGGCGG GGCTGTCGCT GTCGGCGCCG GCAGACCGCC TGCAAGACAG CTGGCTCGAC
AACCTGAAAG ACACCGCCCT GCAGATCTCC AAGGGCATGG GATTCATCCC CGAGGAACAG
CCGGTGCTGC GCGCGGAATG A
 
Protein sequence
MAEADKEPGK TSIQVIERMM LLLDALAGHA DPVSLKALSA STGLHPSTAH RILNDMVACR 
FVDRSDPGSY RLGMRLLELG NLVKARLSVR EAALAPMRAL HRLTGQTVNL SVRQGDEIVY
IERAYSERSG MQVVRAIGGR APLHLTSVGK LFLAADEIGR VRAYATRTGL SGHTRTSITD
LPKLERELSW VRTNGYARDN EELELGVRCI AAGIYDDSRH LVAGLSLSAP ADRLQDSWLD
NLKDTALQIS KGMGFIPEEQ PVLRAE