| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1595 |
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| Symbol | prlC |
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| ID | 1220428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1710531 |
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| End bp | 1712651 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237982 |
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| Product | oligopeptidase A |
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| Protein accession | NP_519716 |
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| Protein GI | 17546314 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCA CCTCGCCTGA AGTCGCCACC CCGGCTGCCA ACCCGCTTCT CGATTTCTCC
GGTCTGCCGC GCTTTGCGGA GATCCGCCCC GAGCACATCA CGCCGGCGCT CGACGTGCTG
CTGGAGCGCG CCACCGCCGC CGTGGTCCGC ATCAAGGACC CGGCCACGCC ATCCACCTGG
GACCATGTCG TCGCGGCACT GGAAGACGCC ACCGAGCCGC TCGGCCGCGC CTGGGGCATC
GTCAGCCACC TGAGCTCGGT GGCCGATACG CCGGCGCTGC GCGAGGCCCA CGCCGCCAAC
CTGCCCCGCG TGACCGAATT CTGGTCGGCC CTCGGACAGG ACCTGGAACT GTTCCAGAAG
TACAAGGCGA TCGCCGAAAG CGCCGAATAC GCCACGCTGA CGGCACCGCG CAAGCAGCTG
CTCGACAACG AACTGCGCGG CTTCCGCCTG GGCGGCGCCG AGCTGCCGGA AGACCGCAAA
CCGCGCTTCG CCGCCATCCA GGAGCAGCAG GCGCAGCTGA CCAAGGCGTT CAGCGACCAC
GTGCTGGACG CGACCAACGG CTACGCGCTG CGGATCGACG ACGAGGCGCG CCTGTCCGGC
CTGCCCGAAG ATGCCCGGCA AGCCGCGCAC GAAGCCGCCC GCCGCGACGA TCCGGCCAGC
ACCGGCTGGA AGTTCACGCT GCACTTCCCG TCGTACTTCC CGGTGCTGCA GTACGCGAAC
GACCGCGCGC TGCGCCGCAC GCTGTACGAG GCCAACGTCA CGCGCGCCTC GGAGCTGGGG
CCCCAGCACG GCAGCGGCAA GCCCGAGTGG GACAACACCG CCAACATGGC CGAACAGCTG
GCCTTGCGCA CCGAAGAGGC GCACATGCTC GGCTACCGCA ATTTCGGCGA GGTATCGCTG
GTGCCCAAGA TGGCCGACTC GCCCGAAGCG GTGCTGCGCT TCCTGGGCGA GCTGGCCGAC
CGCGCCCGCC CCTTCGCCGA GAAAGACTGG ACCGAGCTGC AGGCGTTCGC CAAGACCACG
CTGGGCATCG ACAAACTCGA GCCGTGGGAC ATGGCCTACG CCTCCGAAAA GCTGCGCGAA
GCCCGCTATG CCTTCTCCGA GCAGGAGGTG AAGCAGTACT TCCCGGAGCC GGCCGTGCTG
GACGGCCTGT TCAACGTCGT GCAGACGCTG TTCTCCGTGC AGATCCGCCC GGAGCCGGCC
GAGGTGTGGC ACCCCGACGT GCGCTTCTTC CGCGTCGAAT CGGCGCAGGG CGAGCTGCTG
GCGCAGTTCT ACATCGACCT GTACGCCCGT GACGGCAAGC GCGGCGGCGC CTGGATGGAC
GACGCCCGCG GCCGCAAGGT GCTGGCCGAC GCCGGTGTGC AAACCCCGGT GGCCTACCTC
ACCTGCAACT TCTCCGGCCC GGTCGGCGAC AAGCCTGCGC TGTTCACGCA CGACGAGGTC
ATCACCCTCT TCCACGAATT CGGCCACGGC CTGCACCACA TGCTCACGCA GGTGGACGAA
CTGGGCGTGT CGGGCATCAA CGGCGTGGAA TGGGATGCGG TAGAGCTGCC CTCGCAGTTC
ATGGAGAACT TCTGCTGGGA GTGGGAAGTG CTCTCGCGCA TGACCCGCCA CGTCGAGTCC
GGCGAGCCGC TGCCGCACGC GCTGTTCGAC CGCATGCTGG CCGCCAAGAA CTTCCAGAAC
GGCATGGCGA CGCTGCGCCA GATCGTGTTC TCGACGTTCG ACATGCACCT GCATACCGAC
TTCGATCCGA AGGGCGCGAC CTCGGTGCTG GAGCTGTCGC GGCAGATCAA CAATCGCTTC
CATGTCGTGC CGCAGGCGGT GCTGTCGCGC TGGCCGAACA CCTTCAGCCA CATCTTCGCG
GGCGGCTACG CGGCGGGCTA CTACAGCTAC AAGTGGGCTG AAGTGCTGTC GGCCGATGCC
TACGCGGCCT TCGAGGAAGC CGGCAAGCTG ACCGGCTCGG TGCTCGATGC CGAGACCGGC
GCGCGCTACC GCCGCGAGGT GCTGGCCGTC GGCGGCAGCC GCCCGGCGAT CGAGTCGTTC
AAGGCCTTCC GCGGCCGCGC GCCAAGCATC GACGCGCTGC TGCGCCATGG CGGCATGGTG
GTGACGGCCG AACCCGCCTG A
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| Protein sequence | MTVTSPEVAT PAANPLLDFS GLPRFAEIRP EHITPALDVL LERATAAVVR IKDPATPSTW
DHVVAALEDA TEPLGRAWGI VSHLSSVADT PALREAHAAN LPRVTEFWSA LGQDLELFQK
YKAIAESAEY ATLTAPRKQL LDNELRGFRL GGAELPEDRK PRFAAIQEQQ AQLTKAFSDH
VLDATNGYAL RIDDEARLSG LPEDARQAAH EAARRDDPAS TGWKFTLHFP SYFPVLQYAN
DRALRRTLYE ANVTRASELG PQHGSGKPEW DNTANMAEQL ALRTEEAHML GYRNFGEVSL
VPKMADSPEA VLRFLGELAD RARPFAEKDW TELQAFAKTT LGIDKLEPWD MAYASEKLRE
ARYAFSEQEV KQYFPEPAVL DGLFNVVQTL FSVQIRPEPA EVWHPDVRFF RVESAQGELL
AQFYIDLYAR DGKRGGAWMD DARGRKVLAD AGVQTPVAYL TCNFSGPVGD KPALFTHDEV
ITLFHEFGHG LHHMLTQVDE LGVSGINGVE WDAVELPSQF MENFCWEWEV LSRMTRHVES
GEPLPHALFD RMLAAKNFQN GMATLRQIVF STFDMHLHTD FDPKGATSVL ELSRQINNRF
HVVPQAVLSR WPNTFSHIFA GGYAAGYYSY KWAEVLSADA YAAFEEAGKL TGSVLDAETG
ARYRREVLAV GGSRPAIESF KAFRGRAPSI DALLRHGGMV VTAEPA
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