Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1531 |
Symbol | pstA |
ID | 1220360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1635474 |
End bp | 1636358 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637237914 |
Product | phosphate transporter permease subunit PtsA |
Protein accession | NP_519652 |
Protein GI | 17546250 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0581] ABC-type phosphate transport system, permease component |
TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.326604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.990614 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACGC CCTCCATCCC GGCCGTCCGC GCCGACTCGG AAAAGATCAA GTCGCGCCTG CAGGCCCGTC GCCGCAACGT CAACCGCTTG GCCCTGACGC TGTCGCTGGC GGCCATGGGC TTCGGCCTGG TGTGGCTGGC GTGGATCCTG TGGACCACGC TGACGCTCGG TATCGACGGG TTGTCGCTGT CGCTGTTCAC GCAGATGACG CCGCCGCCGA ACACGCCGGG CGGCGGTCTG GCCAACGCCA TTGTCGGCAG CTTCCTGATG GTGGGGCTGG CCACGCTGGT CGGCACGCCG CTGGGCATCC TGGCCGGCAT CTACCTGTCC GAGTACGGCA AGACCTCGGC GCTGGCCAGC GTCACGCGCT TCATCAACGA CATCCTGCTC TCGGCGCCGT CCATCGTGAT CGGGCTGTTT GTCTACGCGA TCGTGGTGGC GCGCGTGCAT CACTTCTCCG GCATCGCGGG CGTGATCGCG CTGGCGCTGC TGCAGGTCCC CATCGTCGTG CGCACCACCG AGAACATGCT GAACCTGGTG CCCAACGCGA TGCGCGAGGC CGCCATGGCG CTCGGCACGC CCAAGTGGAA GATGGTGCTG TCGATCACGC TGAAGGCTTC GTATGCGGGT GTGATCACCG GCGTGCTGCT GGCCATCGCC CGCATTGCCG GCGAGACGGC GCCGCTGCTC TTCACCGCGC TGAACAACCA GTTCTGGAGC CTGGACCTGA ACCAGCCGAT CGCCAGCGTG CCGGTCGTGA TCTTCCGCTT TGCGATGAGC CCGTTCCCCG AGTGGCAGCA ACTGGCCTGG GCCGGGGTGT TCCTGATTAC GCTGGGTGTG CTGGGGCTGA ACGTCCTCGC GCGTGCCTTG TTCACCAAGA AATGA
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Protein sequence | MRTPSIPAVR ADSEKIKSRL QARRRNVNRL ALTLSLAAMG FGLVWLAWIL WTTLTLGIDG LSLSLFTQMT PPPNTPGGGL ANAIVGSFLM VGLATLVGTP LGILAGIYLS EYGKTSALAS VTRFINDILL SAPSIVIGLF VYAIVVARVH HFSGIAGVIA LALLQVPIVV RTTENMLNLV PNAMREAAMA LGTPKWKMVL SITLKASYAG VITGVLLAIA RIAGETAPLL FTALNNQFWS LDLNQPIASV PVVIFRFAMS PFPEWQQLAW AGVFLITLGV LGLNVLARAL FTKK
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