Gene RSc1522 details

Gene Information

• Locus tag: RSc1522
• Symbol: greA
• ID: 1220351
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 1626430
• End bp: 1626906
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637237905
• Product: transcription elongation factor GreA
• Protein accession: NP_519643
• Protein GI: 17546241
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCACCA TTCCGATTAC CAAGCGCGGT GCCGAGATGC TCAAGGATGA GCTGCAACGC 
CTGAAGACCA AGGAGCGTCC AGCCGTTGTC AACGCCATCG CCGAAGCGCG TGCCCAGGGC 
GATCTGTCCG AAAACGCCGA CTACGACGCC GCCAAGGAGC GCCAGGGCTT CATCGAGGGC 
CGCATCCTCG AGATCGAGTC CAAGCTGGCT GCTGCGCAGG TCATCGACCC GGCAGGGCTG 
GATGCCGATG GCCGCATCGT CTTCGGCGCC ACCATCGACC TGGAAGATCT GGACTCCGGC 
AAGCCGGTCA CCTACCAGAT CGTCGGCGAC GATGAAGCCG ATCTGGATAG CGGCAAGATC 
TCGATCAGCT CGCCGATTGC GCGCGCGCTG ATCGGTAAGT ACGAAGGCGA TGTCGCCACC 
GTGGTGGCGC CGGGCGGCGA ACGCGAATAC GAAGTGCGCG CGGTCAAGTA CCTCTGA 

 

Protein sequence

MSTIPITKRG AEMLKDELQR LKTKERPAVV NAIAEARAQG DLSENADYDA AKERQGFIEG 
RILEIESKLA AAQVIDPAGL DADGRIVFGA TIDLEDLDSG KPVTYQIVGD DEADLDSGKI 
SISSPIARAL IGKYEGDVAT VVAPGGEREY EVRAVKYL