Gene RSc1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1505 
Symbol 
ID1220334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1610507 
End bp1611511 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content72% 
IMG OID637237888 
Productalcohol dehydrogenase-like oxidoreductase protein 
Protein accessionNP_519626 
Protein GI17546224 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID[TIGR02822] zinc-binding alcohol dehydrogenase family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCA TGGTCTGCTC GCGCGCCGGT GCGCCGCTGC AATGGCAGAC CGTGCCGCGG 
CCCGAACCCG GTCCCGGTGA AGTCCGGATC GCGGTGTCGG TGTGCGGCGT CTGCCGGACG
GACCTGCATA TCGTCGACGG CGAATTGCCC GATCCGAAGC CGGCGCTGAT TCCGGGGCAC
GAGATCGTCG GCACGGTCGA TGCGTGCGGA CCCGGCGTCA GCGGGCTCAC CACGGGCGAG
CGCGTCGGCG TGCCCTGGCT GGGCTGGAGC TGCGGCACCT GCCCGTTCTG CCGGCGCGAC
CAGGAAAACC TGTGCGACCG GCCGCGCTTC ACCGGCTACA CGCGTGACGG CGGCTACGCC
GAATACACCG TTTGCGATGC CCGCTACTGC CTTCCCATCC CGGCACGGTA CGACGATGCC
CACGCGGCGC CTCTGCTCTG CGCGGGGCTG ATCGGCTACC GTACGCTGCG CATGGCGGGC
GACGCGCGCC GCCTTGGCAT CTATGGCTTC GGCGCGGCGG CCCACCTGGT CACGCAGATT
GCCGTGGCCG AGCAGCGCGA AGTCTTTGCC TTCACCCGGG CGGGGGATAC CGGCGCGCAG
CAGCTCGCGC GCGACACCGG CGCCTGCTGG GCGGGCGCGA GCGAAGCGCC GCCGCCCGCG
CCGCTCGATG CCGCGCTGAT CTTCGCCCCG GTGGGGGCGC TGGTGCCGCT CGCGCTGCAG
GCCGTCGTCA AGGGTGGCAC GGTGGTCTGC GGCGGCATCC ACATGAGCGA CATCCCGGCG
TTTCCCTATC GGCTGCTCTG GGAAGAACGC AAGCTGATGT CGGTAGCGAA CCTGACGCGC
GCCGACGGCC TGGCGCTGAT GCGCGTGGCG GCGACGGTGC CGCTGCAATC GCACGTCACG
CTCTACCCGC TCGCCGAAGC CAATGCCGCG CTCGATGATC TGCGCGCGGG ACGGGTGACC
GGCGCGGCCG TCCTCCAGGT CCGGAGCCCG ATCGACGGGC CTTGA
 
Protein sequence
MQAMVCSRAG APLQWQTVPR PEPGPGEVRI AVSVCGVCRT DLHIVDGELP DPKPALIPGH 
EIVGTVDACG PGVSGLTTGE RVGVPWLGWS CGTCPFCRRD QENLCDRPRF TGYTRDGGYA
EYTVCDARYC LPIPARYDDA HAAPLLCAGL IGYRTLRMAG DARRLGIYGF GAAAHLVTQI
AVAEQREVFA FTRAGDTGAQ QLARDTGACW AGASEAPPPA PLDAALIFAP VGALVPLALQ
AVVKGGTVVC GGIHMSDIPA FPYRLLWEER KLMSVANLTR ADGLALMRVA ATVPLQSHVT
LYPLAEANAA LDDLRAGRVT GAAVLQVRSP IDGP