Gene RSc1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1498 
Symbol 
ID1220327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1603642 
End bp1604232 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content69% 
IMG OID637237881 
Producthypothetical protein 
Protein accessionNP_519619 
Protein GI17546217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00731295 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCCGG AACTCGCCCG GCGCAGGTTC ATGATCGTTC CGGCGCTCAT CGACGAGCGA 
TGGGCGGGGA TGCTCTATTA CGTCCTGCTG CTGCGGAACT GGCGGGGCGA GGCCAAGCAC
GACCGCCAGT CGCCGGCGGC CGACAGCCAT TGGGGCGACG CTACCCTGGA TGCCACGCTG
CTGGCTCTGA AGTCCGGCAT CGAGCAGGTG TGCGGCTGCT GGCTTCTGCC CACCTACGCC
TACGCCCGGC TCTACTTCCA CGGAGACGAT CTGGCGCGTC ATCGCGACCG GGCCGCCTGC
CAGATCGCGG CGACGATTCA TCTGGGCTCC AGCGATGGCC ACGCGCCGCC GATCTGGTTC
GAGCCCGACG TTGCCGTCGC CCAGCGGCCG GGCGATGCGG TCGTCTATCT TGGCGACAGC
ATCGACCACT GGCGCGAGCC GTTCGGCGGC GAGAACTTTG GCCAACTGTT CCTGAACTAC
GTCTTCGCCG ACGGCGAGCG GGCCGGGCTG CTCCACGACG GGCGGCGCAA CGCGTTTCCG
CCCTCGCTCT CGCCCCGGCC GGCGGCGGCC ATGCCGGGGT GCGTCCGATG A
 
Protein sequence
MVPELARRRF MIVPALIDER WAGMLYYVLL LRNWRGEAKH DRQSPAADSH WGDATLDATL 
LALKSGIEQV CGCWLLPTYA YARLYFHGDD LARHRDRAAC QIAATIHLGS SDGHAPPIWF
EPDVAVAQRP GDAVVYLGDS IDHWREPFGG ENFGQLFLNY VFADGERAGL LHDGRRNAFP
PSLSPRPAAA MPGCVR