Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1451 |
Symbol | |
ID | 1220280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1552553 |
End bp | 1553104 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637237834 |
Product | putative hydrolase protein |
Protein accession | NP_519572 |
Protein GI | 17546170 |
COG category | [F] Nucleotide transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0590] Cytosine/adenosine deaminases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.849244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACTC CCCACGTGCT GACGCCGCCG CCAGGCATGT CCGCCCACGA GCGCGACGGC TACTGGATGC AGCAGGCGCT GGTGCAGGCC CGTCTGGCGT GGGGCGAGGG CGAGGTGCCG GTGGGCGCGG TGGTGGTGCG GGGCAACGAG ATCGTCGGGG TCGGCTATAA CGCGCCGATC GGTACGCACG ATCCGTCCGC CCATGCCGAG ATGCGCGCGC TGCGGCAGGC CGCCGTCAGG CTGGGCAATT ACCGCCTGCC CGAATGCGAA GTGTTCGTGA CGCTGGAGCC GTGCGTGATG TGCGCGGGCG CCATGCTGCA CGCCCGCGTG GCGCGCGTCG TCTACGGCGC GCCCGATCCC AAGACCGGCG CGGCCGGCAG CGTGCTGGAC CTGTTTGCCG AGACGCGCCT GAACCACCAG ACCGCCATCA TCGGCAGCGT GCTCGCGCAG GACTGCGGCG ACATGCTGCG CGCCTTCTTC GCCGAGCGCC GCGCCAGCCA GCGCGCCGCG CGCATGGCCT CCGCCTCCGA CGATTCCGCT TCCGCCGCAT GA
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Protein sequence | MTTPHVLTPP PGMSAHERDG YWMQQALVQA RLAWGEGEVP VGAVVVRGNE IVGVGYNAPI GTHDPSAHAE MRALRQAAVR LGNYRLPECE VFVTLEPCVM CAGAMLHARV ARVVYGAPDP KTGAAGSVLD LFAETRLNHQ TAIIGSVLAQ DCGDMLRAFF AERRASQRAA RMASASDDSA SAA
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