Gene RSc1451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1451 
Symbol 
ID1220280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1552553 
End bp1553104 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content72% 
IMG OID637237834 
Productputative hydrolase protein 
Protein accessionNP_519572 
Protein GI17546170 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.849244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTC CCCACGTGCT GACGCCGCCG CCAGGCATGT CCGCCCACGA GCGCGACGGC 
TACTGGATGC AGCAGGCGCT GGTGCAGGCC CGTCTGGCGT GGGGCGAGGG CGAGGTGCCG
GTGGGCGCGG TGGTGGTGCG GGGCAACGAG ATCGTCGGGG TCGGCTATAA CGCGCCGATC
GGTACGCACG ATCCGTCCGC CCATGCCGAG ATGCGCGCGC TGCGGCAGGC CGCCGTCAGG
CTGGGCAATT ACCGCCTGCC CGAATGCGAA GTGTTCGTGA CGCTGGAGCC GTGCGTGATG
TGCGCGGGCG CCATGCTGCA CGCCCGCGTG GCGCGCGTCG TCTACGGCGC GCCCGATCCC
AAGACCGGCG CGGCCGGCAG CGTGCTGGAC CTGTTTGCCG AGACGCGCCT GAACCACCAG
ACCGCCATCA TCGGCAGCGT GCTCGCGCAG GACTGCGGCG ACATGCTGCG CGCCTTCTTC
GCCGAGCGCC GCGCCAGCCA GCGCGCCGCG CGCATGGCCT CCGCCTCCGA CGATTCCGCT
TCCGCCGCAT GA
 
Protein sequence
MTTPHVLTPP PGMSAHERDG YWMQQALVQA RLAWGEGEVP VGAVVVRGNE IVGVGYNAPI 
GTHDPSAHAE MRALRQAAVR LGNYRLPECE VFVTLEPCVM CAGAMLHARV ARVVYGAPDP
KTGAAGSVLD LFAETRLNHQ TAIIGSVLAQ DCGDMLRAFF AERRASQRAA RMASASDDSA
SAA