Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1449 |
Symbol | |
ID | 1220278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1551351 |
End bp | 1551989 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637237832 |
Product | hypothetical protein |
Protein accession | NP_519570 |
Protein GI | 17546168 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTACG CCGTCAAGGA AATCTTCTAC ACGCTGCAGG GCGAGGGTGC CAACACCGGC CGCGCAGCCG TGTTCTGCCG CTTCGCGGGC TGCAACCTGT GGAGCGGCCG CGAGGCCGAC CGCGCCGCCG CCATCTGCCA GTTCTGTGAC ACCGATTTCG TCGGCACGGA CGGCACGCTG GGCGGCAAAT ATCCCACCGC CGATGCACTT GCCGACACCG TCGCCGCCCA ATGGCCGGCC GCGGCCACGG GCGGGCGGCC GCTGGTGGTC TGCACCGGCG GCGAGCCGCT GCTGCAGCTC GACCGGCCCC TGATCGACGC GCTGCACGCG CGCGGCTTCG AGATCGCCAT CGAGACCAAC GGCACCCTCG CCGTGCCGGA CGGCATCGAC TGGGTTTGCG TGAGCCCGAA AATGGGCGCC GAACTGGTCG TCACCCGCGG CGACGAGCTC AAGGTGGTGA TCCCGCAGCC GGGCCAGGAC CTCGACGCCT ACGAACGGCT GGATTTCCGG CATTTCTTCC TGCAGCCCAT GGATGGGCCG CTGGCGCGCC GGAATACAGC GCTGGCCGTC GAGCTGTGCC AGCGTCGTCC GCGCTGGCAT CTGTCGCTGC AAACCCATAA GATGCTGGGC ATCCGCTGA
|
Protein sequence | MTYAVKEIFY TLQGEGANTG RAAVFCRFAG CNLWSGREAD RAAAICQFCD TDFVGTDGTL GGKYPTADAL ADTVAAQWPA AATGGRPLVV CTGGEPLLQL DRPLIDALHA RGFEIAIETN GTLAVPDGID WVCVSPKMGA ELVVTRGDEL KVVIPQPGQD LDAYERLDFR HFFLQPMDGP LARRNTALAV ELCQRRPRWH LSLQTHKMLG IR
|
| |