| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1424 |
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| Symbol | smpB |
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| ID | 1220248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1524926 |
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| End bp | 1525372 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637237802 |
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| Product | SsrA-binding protein |
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| Protein accession | NP_519545 |
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| Protein GI | 17546143 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0442544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00854817 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACCATCG CCGACAACAA GAAAGCCTTT TTCGATTACT TCGTCGAAGA GCGCTATGAG
GCGGGCATCG CACTCGAAGG CTGGGAGGTG AAGGCCATCC GCGCCGGCCG CGTGCAGATC
AAGGAAGGCT ACGTCGTCAT TCGCGACGCC GAACTGTTCC TGATCGGGGC ACACATCAGC
CCGCTGCAAT CCGCCTCCAC GCACGTCAAG CCCGACCCGA CGCGCACCCG CAAGCTGCTG
CTGCACGCCG AAGAGATCAA GAAGCTGATC GGCAAGGTCG AGCAGCGCGG CTATACGCTC
GTGCCGCTCA ACCTGCACTA TGCGCGCGGC CGCGTGAAGT GCGAGATCGG CCTGGCCAAG
GGCAAGAAGC TCTACGACAA GCGCGAGACC GAGAAGGACC GCGACTGGCA GCGCGAGAAG
GCGCGGCTCA TGCGCGAGAA GGCCTGA
|
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| Protein sequence | MTIADNKKAF FDYFVEERYE AGIALEGWEV KAIRAGRVQI KEGYVVIRDA ELFLIGAHIS
PLQSASTHVK PDPTRTRKLL LHAEEIKKLI GKVEQRGYTL VPLNLHYARG RVKCEIGLAK
GKKLYDKRET EKDRDWQREK ARLMREKA
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