| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1421 |
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| Symbol | ppsA |
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| ID | 1220245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1520988 |
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| End bp | 1523375 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637237799 |
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| Product | phosphoenolpyruvate synthase |
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| Protein accession | NP_519542 |
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| Protein GI | 17546140 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0887708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00267655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCAACC TGTCGATGGA CGGCGCCTAC GTGCTGCCGT TCGAGCAATT GCGGATGACC
GATGTCGAGG TCGTCGGCGG CAAGAACGCA TCGCTGGGCG AGATGATCTC CCAACTGGAC
AGCGCCGGCG TGCGCGTTCC GGGCGGTTTT GCCACCACGG CACTGGCTTT CCGCGATTTC
CTCCAGCACA ACAACCTGAC CGAGCGCATT TCCCAGCGCC TGGCCAGCCT GGACGTCGAC
GACGTCAAGG CGCTGGCCGC GGCCGGCAAG GAAATCCGCG AATGGGTCGC CACGGCGCCG
TTCCAGTCGC GCCTGGAGCA GGAGATCCGC GAGCATTTCG AACGCGTCTC CAAGCGCGAG
GGCGCCGAGG CCTCGTTCGC GGTGCGCTCG TCGGCCACGG CCGAAGACCT GCCGGACGCC
TCGTTCGCCG GCCAGCAGGA GAGCTACCTC AACGTCTCCG GCATCGATGA CGTGCTCGAC
AAGATCAAGC ACGTGTTCGC CTCGCTGTAC AACGACCGCG CTATCTCCTA CCGCGTGCAC
AAGGGCTTCG CCCACGACGT GGTGGCGCTC TCCGCCGGCA TCCAGCGCAT GGTGCGCTCG
GACTGCGGCG CGTCGGGCGT GATGTTCACG ATCGACACCG AATCGGGCTT CCAGGACGTC
GTCTTCATCA CCTCCAGCTA CGGCCTGGGC GAGACGGTGG TGCAGGGCGC GGTCAACCCG
GACGAGTTCT ACGTGTTCAA GCCGACGCTG GCCGCCGGCA AGTACCCGAT CATCCGCCGC
TCGATCGGCT CCAAGCTGAT CAAGATGGAG TTCACGCAGG CCGGCGAGGA AGGCCGCGTC
AAGACCGTCG ACGTGCCGGG CGAGTTGCGC AACCGCTACT CGCTGGTCGA CGAAGACGTG
GTCGAGCTGG CCAAGTACGC CGTCATCATC GAGAAGCACT ACGGTCGCCC GATGGACATC
GAGTGGGGTA AGGACGGTAA GGACGGCAAG ATCTACATCC TGCAGGCCCG CCCCGAGACG
GTGAAGAGCC AGTCGGTCGG CAAGGTCGAG CAGCGCTTCC GCCTGAAGGG CTCGGCGCCG
GTGCTGACCA CCGGCCGCGC GATCGGCCAG AAGATCGGTA CGGGCCCCGT GCGCGTGATC
AACGATCCGG CCGAAATGGA GCGCGTGCAG CCGGGCGACG TGCTGGTCGC CGACATGACC
GACCCGAACT GGGAGCCGGT GATGAAGCGC GCCTCGGCCA TCGTCACCAA CCGTGGCGGC
CGCACCTGTC ACGCCGCCAT CATCGCGCGT GAGCTGGGCG TGCCGGCCGT GGTCGGCTGC
GGCGACGCCA CCGACCTGCT GAAGGACGGC ACGCTGGTCA CCGTGTCCTG CGCCGAGGGC
GACGAAGGCA AGATCTACGA CGGCCTGCTC GAGACGGAAA TCACCGAAGT GCGCCGCGGC
GAGATGCCGC CGATCGACGT CAAGATCATG ATGAACGTCG GCAACCCGCA GCTGGCCTTC
GAGTTCGCGC AGATCCCGAA CGGCGGCGTG GGCCTGGCCC GCCTCGAGTT CATCATCAAC
AACAACATCG GCGTCCACCC GAAGGCGATC CTCGACTACC CGCAAGTCGA CAGCGACCTG
AAGAAGGCCG TGGAAAGCGT GGCCCGCGGC CATGCCAGCC CGCGCGCGTT CTACGTCGAC
AAGCTGGCCG AGGGCATTGC GACCATCGCC GCCGCGTTCT ATCCGAAGCC CGTGATCGTG
CGCCTGTCCG ACTTCAAGTC GAACGAGTAC AAGAAGCTGA TCGGCGGTTC GCGCTACGAG
CCGGACGAAG AGAACCCCAT GCTGGGCTTC CGCGGCGCCT CGCGTTACAT CGCCGAAGAC
TTCGCCGAGG CCTTCGAGAT GGAGTGCCGC GCCATGAAGC GCGTGCGCGA AGAGATGGGC
CTGACCAACG TCGAGATCAT GGTGCCGTTC GTGCGCACGC TGGGCCAGGC CGCCATGGTG
GTCGACCTGC TGGGCAAGTA CGGCCTGAAG CGCGGCGAGA ACGACCTGCG CCTGATCATG
ATGTGCGAAG TGCCGTCCAA TGCGATCCTG GCCAAGGAGT TCCTGGAGTA TTTCGACGGC
TTCTCGATCG GCTCGAACGA CCTGACGCAG CTGACGCTGG GCCTGGACCG CGACTCCGGC
ATGGAACTGC TCGCCAGGGA TTTCGACGAG CGTGATCCGG CGGTCAAGTT CATGCTGTCG
CGCGCCATCT CGACCGCGAA GTCGATGGGC AAGTATGTCG GCATCTGCGG CCAGGGCCCG
TCCGACCACC CGGACTTTGC CGAGTGGCTG GCCAAGGAAG GCATCTCGTC CATCTCGCTG
AACCCGGATT CGGTGATCGA CACCTGGCAG AAGCTGGGTT CGGCCTGA
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| Protein sequence | MTNLSMDGAY VLPFEQLRMT DVEVVGGKNA SLGEMISQLD SAGVRVPGGF ATTALAFRDF
LQHNNLTERI SQRLASLDVD DVKALAAAGK EIREWVATAP FQSRLEQEIR EHFERVSKRE
GAEASFAVRS SATAEDLPDA SFAGQQESYL NVSGIDDVLD KIKHVFASLY NDRAISYRVH
KGFAHDVVAL SAGIQRMVRS DCGASGVMFT IDTESGFQDV VFITSSYGLG ETVVQGAVNP
DEFYVFKPTL AAGKYPIIRR SIGSKLIKME FTQAGEEGRV KTVDVPGELR NRYSLVDEDV
VELAKYAVII EKHYGRPMDI EWGKDGKDGK IYILQARPET VKSQSVGKVE QRFRLKGSAP
VLTTGRAIGQ KIGTGPVRVI NDPAEMERVQ PGDVLVADMT DPNWEPVMKR ASAIVTNRGG
RTCHAAIIAR ELGVPAVVGC GDATDLLKDG TLVTVSCAEG DEGKIYDGLL ETEITEVRRG
EMPPIDVKIM MNVGNPQLAF EFAQIPNGGV GLARLEFIIN NNIGVHPKAI LDYPQVDSDL
KKAVESVARG HASPRAFYVD KLAEGIATIA AAFYPKPVIV RLSDFKSNEY KKLIGGSRYE
PDEENPMLGF RGASRYIAED FAEAFEMECR AMKRVREEMG LTNVEIMVPF VRTLGQAAMV
VDLLGKYGLK RGENDLRLIM MCEVPSNAIL AKEFLEYFDG FSIGSNDLTQ LTLGLDRDSG
MELLARDFDE RDPAVKFMLS RAISTAKSMG KYVGICGQGP SDHPDFAEWL AKEGISSISL
NPDSVIDTWQ KLGSA
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