Gene RSc1418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1418 
SymbolrnhB 
ID1220242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1518122 
End bp1518832 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content72% 
IMG OID637237796 
Productribonuclease HII 
Protein accessionNP_519539 
Protein GI17546137 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.222636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0561712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCG ATTCCACCGA GATTCCGCAA CTCGCGCTCC CGCTGTCGCA GTCGCCGGCG 
GCGGGCAAGC GCGCGCGCCG CATCCTGTGC GGCGTCGACG AGGCCGGGCG CGGGCCGCTG
GCGGGGCCGG TGACGGCTGC CGCCGTGGTG CTCAATCCGC GCAAGCCGAT CCAGGGGCTG
GCCGACTCCA AGGTGCTGAC CGCCAAAAAG CGTGAGGCGC TGTACGACGA GATCGTCGAG
AAGGCGCTCG CGTGGCATGT GGCCGAAGCC ACCGTCGAGG AGATCGATCG CATCAACATC
CTGCATGCGA CCATGCTGGC GATGCAGCGC GCCGTGCAGG GCGTCGCCGC GCAAGGGGTG
CTGCCCGACC TGGTGCAGGT GGACGGCAAC CGTTGTCCGC AGGTGGCGTT CGCGGTGGAG
GCCATCGTCA AGGGCGATGC CCTGGTGCCG GCCATCTCGG CCGCATCGAT CCTGGCCAAG
GTGACGCGCG ACCGCCAACT GGCGGCCCTG CACATCGCAT TTCCGCAGTA CGGCTTCGAC
GTACACGCCG GCTACGGCAC GCCGCAGCAC CTGGCCGCCA TCGAGCGGCA CGGCGTGACG
CCGCATCATC GCCGCTCGTT CGCCCCCGTG CGCCGCGCGC TGGACGGTGC GCCGCCCCCG
GCCGGCGACG CCGTGCCGCA GACCGACGCC AAGACGGCGT GGGCCGACTG A
 
Protein sequence
MTADSTEIPQ LALPLSQSPA AGKRARRILC GVDEAGRGPL AGPVTAAAVV LNPRKPIQGL 
ADSKVLTAKK REALYDEIVE KALAWHVAEA TVEEIDRINI LHATMLAMQR AVQGVAAQGV
LPDLVQVDGN RCPQVAFAVE AIVKGDALVP AISAASILAK VTRDRQLAAL HIAFPQYGFD
VHAGYGTPQH LAAIERHGVT PHHRRSFAPV RRALDGAPPP AGDAVPQTDA KTAWAD