Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1418 |
Symbol | rnhB |
ID | 1220242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1518122 |
End bp | 1518832 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637237796 |
Product | ribonuclease HII |
Protein accession | NP_519539 |
Protein GI | 17546137 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.222636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0561712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCG ATTCCACCGA GATTCCGCAA CTCGCGCTCC CGCTGTCGCA GTCGCCGGCG GCGGGCAAGC GCGCGCGCCG CATCCTGTGC GGCGTCGACG AGGCCGGGCG CGGGCCGCTG GCGGGGCCGG TGACGGCTGC CGCCGTGGTG CTCAATCCGC GCAAGCCGAT CCAGGGGCTG GCCGACTCCA AGGTGCTGAC CGCCAAAAAG CGTGAGGCGC TGTACGACGA GATCGTCGAG AAGGCGCTCG CGTGGCATGT GGCCGAAGCC ACCGTCGAGG AGATCGATCG CATCAACATC CTGCATGCGA CCATGCTGGC GATGCAGCGC GCCGTGCAGG GCGTCGCCGC GCAAGGGGTG CTGCCCGACC TGGTGCAGGT GGACGGCAAC CGTTGTCCGC AGGTGGCGTT CGCGGTGGAG GCCATCGTCA AGGGCGATGC CCTGGTGCCG GCCATCTCGG CCGCATCGAT CCTGGCCAAG GTGACGCGCG ACCGCCAACT GGCGGCCCTG CACATCGCAT TTCCGCAGTA CGGCTTCGAC GTACACGCCG GCTACGGCAC GCCGCAGCAC CTGGCCGCCA TCGAGCGGCA CGGCGTGACG CCGCATCATC GCCGCTCGTT CGCCCCCGTG CGCCGCGCGC TGGACGGTGC GCCGCCCCCG GCCGGCGACG CCGTGCCGCA GACCGACGCC AAGACGGCGT GGGCCGACTG A
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Protein sequence | MTADSTEIPQ LALPLSQSPA AGKRARRILC GVDEAGRGPL AGPVTAAAVV LNPRKPIQGL ADSKVLTAKK REALYDEIVE KALAWHVAEA TVEEIDRINI LHATMLAMQR AVQGVAAQGV LPDLVQVDGN RCPQVAFAVE AIVKGDALVP AISAASILAK VTRDRQLAAL HIAFPQYGFD VHAGYGTPQH LAAIERHGVT PHHRRSFAPV RRALDGAPPP AGDAVPQTDA KTAWAD
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