| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1393 |
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| Symbol | dapD |
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| ID | 1220217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1484398 |
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| End bp | 1485225 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637237771 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | NP_519514 |
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| Protein GI | 17546112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAC AACTGCAATC GCTGATCGAA CAAGCGTGGG AAGACCGCGC CAACCTGTCG
CCCAAGGCCG CGCCGAACGA TGTCCGCGCA GCCGTCGCCA ACGTGATCGA CCAGCTCGAC
CAGGGCGCGC TGCGCGTGGC CGAGAAGAAG GACGGCCAGT GGATCGTCAA CCAGTGGGTG
AAGAAGGCCG TGCTGCTGTC GTTCCGCCTG GAAGACAACG CCCCGATGAC GGCCGGCGGC
TTCACGCACT TCTATGACAA GGTGCCCAGC AAGTTCGCCA GCTACACGGC CGACGACTTC
GCGCGCGGCG GCTTCCGCGT GGTGCCGCCG GCCGTGGCGC GCCGCGGTTC GTTCATCGGC
AAGAACGCCG TGCTGATGCC CTCGTACGTG AACATCGGCG CCTACGTGGA CGAAGGCACG
ATGGTCGACA CCTGGGCCAC GGTCGGCTCG TGCGCGCAGA TCGGCAAGAA CGTGCACCTG
TCGGGCGGCG TGGGCATCGG CGGCGTGCTG GAGCCGCTGC AGGCCAACCC GGTCATCATC
GAGGACAACT GCTTCATCGG CGCGCGCTCG GAAGTGGTGG AAGGCGTGAT CGTCGAAGAG
AACTCGGTGA TCTCGATGGG CGTGTACCTG GGCCAGAGCA CCAAGATCTA CGACCGCGAA
ACCGGCGAGG TGCACTACGG CCGCGTGCCG GCCGGCTCGG TGGTGGTGCC GGGCAACCTG
CCGTCCAAGG ACGGCACGTA CAGCCTGTAC TGCGCCGTGA TCGTCAAGAA GGTCGACGCG
CAGACGCGCG CCAAGACCAG CCTCAACGAA CTGCTGCGCG GCGATTGA
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| Protein sequence | MSQQLQSLIE QAWEDRANLS PKAAPNDVRA AVANVIDQLD QGALRVAEKK DGQWIVNQWV
KKAVLLSFRL EDNAPMTAGG FTHFYDKVPS KFASYTADDF ARGGFRVVPP AVARRGSFIG
KNAVLMPSYV NIGAYVDEGT MVDTWATVGS CAQIGKNVHL SGGVGIGGVL EPLQANPVII
EDNCFIGARS EVVEGVIVEE NSVISMGVYL GQSTKIYDRE TGEVHYGRVP AGSVVVPGNL
PSKDGTYSLY CAVIVKKVDA QTRAKTSLNE LLRGD
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