Gene RSc1384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1384 
Symbol 
ID1220208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1475985 
End bp1476800 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content71% 
IMG OID637237762 
Producthypothetical protein 
Protein accessionNP_519505 
Protein GI17546103 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2362] D-aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.803903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCC TGATTTCCGC CGACATCGAA GGCGTCGCCA ATGTCTTCCA CCCGGAGCAG 
ACCCGCGCCG GCAACGCCGA ATACGAACGC GCTCGCCGCT GGATGACGGC CGAGGCCGAC
GCCGCCGTGC GCGGCGCCTT CGAGGGCGGC GCCACCGAGG TCATCGTCAA TGATTCCCAC
GGCGGCTTCC GCAACCTCGT GCCCGACTGG ATGGACGCCC GCGCGCGCTT CGTGCTGGGC
AAGCCGCGCC ATCTGGGCAT GATGGCCGGC GTGGAGGGCT GCGATGCGGT CTGCATGATC
GGCTACCACG CCCGCGCCGG CAGCCGCGGC ACGCTGGCGC ACACCATCAA CAGCTTCGCC
TTCGCGCGCG TCTGGCTCAA CGAGCAGGAG CTGGGCGAGG CCGGCCTCTA CGGTGCGCTG
GCCGGCGAGC GCGGCGTGCC GGTGGCCGTG GCCAGCGGCG ACGACGTGTT CGTCAACGAG
ACCCTGCCGC TGCTGCCGCA CACCACCTTT GTGCAGACCA AGCAGGCCGA GGGCATGAAC
GCGGGGATGT CGCTGTCGTC CGAGCAGGCG TGCGACGCGA TCCTGGCGGC CGTGCGCAGC
GCGGTGCAGC GGGGGCATTT CGGCATGCCG CTGCGCATCC AGCCGCCCAT TGTCTGCCGC
CTGCAGACGC AGACGCCCGC GCTGGCCGAC CTGTTCTGCC AGTGGCCCGC CCTCGAACGG
GTGGACGGCA CCCTGCTGCG CTTCGCGGCC GATTCGGTGG AGCACGCGGT GCGCATGCTC
AACAGCCTGT CGGCCATGTC GTTCATGCTG CGCTGA
 
Protein sequence
MRILISADIE GVANVFHPEQ TRAGNAEYER ARRWMTAEAD AAVRGAFEGG ATEVIVNDSH 
GGFRNLVPDW MDARARFVLG KPRHLGMMAG VEGCDAVCMI GYHARAGSRG TLAHTINSFA
FARVWLNEQE LGEAGLYGAL AGERGVPVAV ASGDDVFVNE TLPLLPHTTF VQTKQAEGMN
AGMSLSSEQA CDAILAAVRS AVQRGHFGMP LRIQPPIVCR LQTQTPALAD LFCQWPALER
VDGTLLRFAA DSVEHAVRML NSLSAMSFML R