Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1384 |
Symbol | |
ID | 1220208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1475985 |
End bp | 1476800 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637237762 |
Product | hypothetical protein |
Protein accession | NP_519505 |
Protein GI | 17546103 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2362] D-aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.803903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATCC TGATTTCCGC CGACATCGAA GGCGTCGCCA ATGTCTTCCA CCCGGAGCAG ACCCGCGCCG GCAACGCCGA ATACGAACGC GCTCGCCGCT GGATGACGGC CGAGGCCGAC GCCGCCGTGC GCGGCGCCTT CGAGGGCGGC GCCACCGAGG TCATCGTCAA TGATTCCCAC GGCGGCTTCC GCAACCTCGT GCCCGACTGG ATGGACGCCC GCGCGCGCTT CGTGCTGGGC AAGCCGCGCC ATCTGGGCAT GATGGCCGGC GTGGAGGGCT GCGATGCGGT CTGCATGATC GGCTACCACG CCCGCGCCGG CAGCCGCGGC ACGCTGGCGC ACACCATCAA CAGCTTCGCC TTCGCGCGCG TCTGGCTCAA CGAGCAGGAG CTGGGCGAGG CCGGCCTCTA CGGTGCGCTG GCCGGCGAGC GCGGCGTGCC GGTGGCCGTG GCCAGCGGCG ACGACGTGTT CGTCAACGAG ACCCTGCCGC TGCTGCCGCA CACCACCTTT GTGCAGACCA AGCAGGCCGA GGGCATGAAC GCGGGGATGT CGCTGTCGTC CGAGCAGGCG TGCGACGCGA TCCTGGCGGC CGTGCGCAGC GCGGTGCAGC GGGGGCATTT CGGCATGCCG CTGCGCATCC AGCCGCCCAT TGTCTGCCGC CTGCAGACGC AGACGCCCGC GCTGGCCGAC CTGTTCTGCC AGTGGCCCGC CCTCGAACGG GTGGACGGCA CCCTGCTGCG CTTCGCGGCC GATTCGGTGG AGCACGCGGT GCGCATGCTC AACAGCCTGT CGGCCATGTC GTTCATGCTG CGCTGA
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Protein sequence | MRILISADIE GVANVFHPEQ TRAGNAEYER ARRWMTAEAD AAVRGAFEGG ATEVIVNDSH GGFRNLVPDW MDARARFVLG KPRHLGMMAG VEGCDAVCMI GYHARAGSRG TLAHTINSFA FARVWLNEQE LGEAGLYGAL AGERGVPVAV ASGDDVFVNE TLPLLPHTTF VQTKQAEGMN AGMSLSSEQA CDAILAAVRS AVQRGHFGMP LRIQPPIVCR LQTQTPALAD LFCQWPALER VDGTLLRFAA DSVEHAVRML NSLSAMSFML R
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