| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1382 |
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| Symbol | |
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| ID | 1220206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1474053 |
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| End bp | 1474952 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237760 |
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| Product | transmembrane ABC transporter protein |
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| Protein accession | NP_519503 |
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| Protein GI | 17546101 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.131281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGG CATCCAGCCC GGCGGTGATC CCGCAGGCCG CCAGCGAACC CGTCCGCACG
CCCTGGAGCG AGTTCTGGCG CAAGTTCCGC AAGCAGCATC TGGCACTCGG CGCCGGCGTG
TTCGTGATCG CGCTGGTGGT GGCGGCGATC CTGGCGCCGC ACCTGGTGCC GTTCGATCCG
GAAAACTATT TCGACTATGA CGCGCTCAAC GCCGGGCCGT CCGCCGCGCA CTGGTTCGGC
GTCGATTCGC TCGGCCGCGA CATCTTCAGC CGCATCCTGA TGGGCACGCG GATCTCGCTG
GAGGCCGGCT TCGTGTCGGT CGTCATCGGC GCCCTCATCG GGACGGTGCT CGGCCTGCTC
GCCGGCTACT ACGAAGGCTG GTGGGACCGC ATCGTCATGC GCATCTGCGA TGTGCTGTTC
GCCTTTCCCG GCATCCTGCT GGCGATCGGC ATCGTGGCGA TCCTGGGCAA CGGCATGGCC
AACGTGATCT TCGCCGTGGC GGTGTTCAGC GTTCCGGCCT TCGCGCGGCT GGTGCGCGGC
AACACGCTGA TGCTCAAGCA CCTGACCTAC GTCGAGGCCG CGCGCAGCAT CGGCGCGTCG
GACCGGACCA TCCTGCTGCG CCACATCCTG CCGGGCACCA TCTCGTCCAT CGTGGTGTAT
TTCTCGATGC GGATCGGCAC CTCGATCATC ACCGCCGCGA GCCTGTCGTT CCTGGGCCTG
GGCGCGCAGC CGCCGACGCC GGAGTGGGGC GCGATGCTCA ACGAGGCGCG CGCCGACATG
GTGACCGCGC CGCATGTGGC GATCTTCCCG AGCCTCGCCA TCTTCCTGAC CGTGCTGGCG
TTCAACCTGC TGGGCGATGG CCTGCGGGAT GCGCTCGACC CCAAGATCGA CCGCCGCTGA
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| Protein sequence | MTQASSPAVI PQAASEPVRT PWSEFWRKFR KQHLALGAGV FVIALVVAAI LAPHLVPFDP
ENYFDYDALN AGPSAAHWFG VDSLGRDIFS RILMGTRISL EAGFVSVVIG ALIGTVLGLL
AGYYEGWWDR IVMRICDVLF AFPGILLAIG IVAILGNGMA NVIFAVAVFS VPAFARLVRG
NTLMLKHLTY VEAARSIGAS DRTILLRHIL PGTISSIVVY FSMRIGTSII TAASLSFLGL
GAQPPTPEWG AMLNEARADM VTAPHVAIFP SLAIFLTVLA FNLLGDGLRD ALDPKIDRR
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