Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1372 |
Symbol | radA |
ID | 1220196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1461787 |
End bp | 1463157 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237750 |
Product | DNA repair protein RadA |
Protein accession | NP_519493 |
Protein GI | 17546091 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.232721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCAAGA GCAAGACGGT CTATACGTGC ACCGAGTGCG GCGGCACGTC GCCGAAATGG GCGGGGCAGT GCCCGCATTG CCAGCAGTGG AACACGCTGG TGGAAACCGT GGCGCAGCCG GCGTCCGGCG CCGGCGCGCG CTTCCAGTCG CTGGCGGCGA GCGCCGTGGT GCGCAAGCTG GCGGACATCG ACGCCGTGGA CGTGCCGCGC TTCTCCAGCG GCATCGACGA ATTCGACCGC GTGCTGGGCG GCGGCCTGGT CGGCGGCGGC GTGGTGCTGA TCGGCGGCGA TCCGGGCATC GGCAAGTCGA CGCTGCTGCT GCAGGCGCTG TCCAACCTGG CGGCCAGCCG GCGCGTGCTG TATGTGAGCG GCGAGGAGTC CGGCGCGCAG ATCGCGCTGC GGGCGCGGCG CCTGGGCGTC GAAAGCCCGA ACCTGGCGCT GCTGGCCGAG ATCCAGCTCG AGCGCATCCA GGCCACCATC GAGGCGGAGA AGCCCGAGGT GGTCGTCATC GACTCCATCC AGACGCTGTA CTCGGAGGCG CTGACCTCGG CGCCGGGCTC GGTGGCCCAG GTGCGCGAAT GCGCGGCGCA GCTCACGCGC ATCGCCAAGC GGCTGGACGT GACCACCATC CTGGTCGGCC ACGTGACCAA GGAGGGCGCA CTGGCGGGCC CGCGCGTGCT GGAGCACATC GTCGATACGG TGCTGTATTT CGAGGGCGAC ACGCATTCGG CCTACCGGCT GGTGCGCGCG TTCAAGAACC GCTTCGGCGC GGTCAACGAG CTGGGCGTGT TCGCCATGAC CGAGCGCGGC CTGCGTGGCG TGGCGAATCC GTCGGCGCTG TTCCTGTCGC AGCACGAGCA GACCGTGCCG GGTTCGTGCG TGCTGGTGAC GCAGGAGGGC ACGCGTCCGC TGCTGGTGGA GATCCAGGCG CTGGTGGATG CGGCGGGCGT GCCGAACCCG CGGCGGCTGG CGGTGGGCCT GGAGCAGAAC CGGCTGGCGA TGCTGCTGGC GGTGCTGCAC CGGCACGCGG GCATTGCCTG CTTTGACCAG GACGTGTTCC TCAATGCCGT GGGCGGGGTC AAGATCACCG AGCCGGCGGC GGACCTGGCG GTGCTGCTGG CGATCCATTC GTCGATGCGC AACAAGCCGC TGCCGCGCGG GCTGGTGGTT TTCGGCGAGA TCGGGCTGGC CGGCGAGATC CGTCCGACGC CGCGCGGGCA GGAGCGCCTG AAGGAAGCGG CCAAGCTGGG CTTCTCGATT GCCGTGATCC CCAAGTCGAA CGCGCCCAAG CAGCCGATCG ACGGCCTGCA GGTGATCGCC GTCGAGCGCA TCGAGCAGGC GATCGACCGG GTGCGCGGGC TGGAGGCTTA A
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Protein sequence | MAKSKTVYTC TECGGTSPKW AGQCPHCQQW NTLVETVAQP ASGAGARFQS LAASAVVRKL ADIDAVDVPR FSSGIDEFDR VLGGGLVGGG VVLIGGDPGI GKSTLLLQAL SNLAASRRVL YVSGEESGAQ IALRARRLGV ESPNLALLAE IQLERIQATI EAEKPEVVVI DSIQTLYSEA LTSAPGSVAQ VRECAAQLTR IAKRLDVTTI LVGHVTKEGA LAGPRVLEHI VDTVLYFEGD THSAYRLVRA FKNRFGAVNE LGVFAMTERG LRGVANPSAL FLSQHEQTVP GSCVLVTQEG TRPLLVEIQA LVDAAGVPNP RRLAVGLEQN RLAMLLAVLH RHAGIACFDQ DVFLNAVGGV KITEPAADLA VLLAIHSSMR NKPLPRGLVV FGEIGLAGEI RPTPRGQERL KEAAKLGFSI AVIPKSNAPK QPIDGLQVIA VERIEQAIDR VRGLEA
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