| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1314 |
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| Symbol | |
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| ID | 1220138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1399060 |
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| End bp | 1399836 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637237692 |
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| Product | lipoprotein transmembrane |
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| Protein accession | NP_519435 |
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| Protein GI | 17546033 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACC GGCACGGTTC TCCGCGCAGC AGCACGCGGT GGGCGGGCCT CGCGATCATC
GCGCTGGCCT GCCTGCTGTC CGCCTGCTCC TCCACGCCCA CCCGCTCCCT CACCTCGCGT
GACACGTCGG GGCAGCGCAC GCACGGTGCG GCGATCAACG ATCCGAGTGC CGGGCTGGAA
GAAATCTCCA TCGAAGCGAT GGCGCTGGTC GGCACGCCAT ACCGCTACGG CGGCAACACG
CCCGACAGCG GCTTCGACTG CAGCGGACTG GTGCGCTACG TCGTGCAGCG CGCCGCCTCG
GTCAACCTGC CGCGCACGGC GGCGGAAATG GGCACGCGCG GCTTCGCGCT CGAGCGCCGC
GACGTCGCAT CAGGCGACCT GGTCTTCTTC AACACGACCG GCCGGCCGAA TTCCCACGTC
GGCATCTATG TGGGCCAGAA CCGCTTCGTG CATGCGCCGG CCACCGGCGG CACCGTCCGG
CTGGAAGACA TGAGCAAGCG CTACTGGGCG AGCCGTTACA TGGGCGCGCG CCGCGTGGTC
GCGGTCAGCA ACCTGCCCGA CTTGCCCGCG TCCCCCGCTG CCGCCACGCA AAGCATCGCC
GCCGGTGCGG CCGCACCCGC CACCGCGCCA GCCCACGCGA ACGACGACGA CCCGCTTGGC
ACACTGGCGC GCGCCCGCGG CACGGAATCC TCGCCCCTGA TGTCGACGCG CAACGCTGCG
CCGGTTGTCG TACCGCCCGC GGACGATGAC CCGATCGCAC GCTTCGCCAC GCAATAA
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| Protein sequence | MPNRHGSPRS STRWAGLAII ALACLLSACS STPTRSLTSR DTSGQRTHGA AINDPSAGLE
EISIEAMALV GTPYRYGGNT PDSGFDCSGL VRYVVQRAAS VNLPRTAAEM GTRGFALERR
DVASGDLVFF NTTGRPNSHV GIYVGQNRFV HAPATGGTVR LEDMSKRYWA SRYMGARRVV
AVSNLPDLPA SPAAATQSIA AGAAAPATAP AHANDDDPLG TLARARGTES SPLMSTRNAA
PVVVPPADDD PIARFATQ
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