| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1293 |
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| Symbol | emrA |
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| ID | 1220116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1377867 |
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| End bp | 1379153 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637237670 |
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| Product | multidrug resistance A (translocase) transmembrane protein |
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| Protein accession | NP_519414 |
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| Protein GI | 17546012 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.538155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA ACACGCCCCA AGCCGCCCCC TCCGCTGCCC CCGCGCCGGC AGCCCCCGCG
GCCATCCCGA ACGGCAGCGG CAACGGCAAG CGCAAGCGCA TGCTGACCAC CCTGGCCGCT
GCCCTGGTGG TGGCCGGCGT CGGCTACGGT CTCTACTGGG GCCTGTATGG CCGCTGGTTC
GAGTCGACCG ACGATGCGTA CGTGCAGGGC AACGTGGTGC AGGTGACGCC GCAGGTCGCG
GGCACCGTGG TCGCCATCCG CGCCGACGAC ACGCAGCTCG TCACCGCGGG CCAGCCGCTG
ATCGAGCTGG ATCGCGCCGA TGCCCGCGTC GCCCTGGAAC AGGCCGAGGC CGCGCTGGCG
CAGGCGGTGC GTCAGGTGCG CACGCTGTAT TCGAACACCG GCGCCTACAC CTCGACGCTC
GCCATGCGCG AATCCGACCT CGCCAAGGCC AAGGAAGACC TGGCCCGCCG CAAGCAGATC
GCCGGCACGG GCGCCGTATC GCAGGAGGAG ATCGCCCACG CGCAGACCTC GCTGCAGGCC
GCCGAGGCCG CCGTCGAGAC CGCCCGGGAG CAACTGCAGG CCAATCGCGT GCTGACCGAG
CAGACCACGC TGGAGCGCCA CCCGAACGTC CTGCAGGCCG CCGCCAAGGT GCGCGAGGCC
TACCTCGCCT ACGCGCGGAC CAGCCTGCCC GCCTCGGTCA CGGGCTATGT CGCCAAGCGT
TCGGTGCAGG TCGGCCAGCG CGTGGCCCCG GGCACGCCGC TGATGGCGAT CGTGCCGCTC
GACCAGCTGT GGGTCGACGC CAACTTCAAG GAAGTGCAGG TGCGCCACAT GCGGGTCGGC
CAGCCGGTCG AGCTGGTGGC CGACGTCTAC GGCAGCAGTG TGACCTACCA TGGCAAGGTG
GTCGGCTTCT CGGCCGGCAC CGGTTCGGCG TTCTCGCTGC TGCCGGCGCA GAACGCCACC
GGCAACTGGA TCAAGGTGGT GCAGCGCCTG CCGGTGCGCG TCTCGCTCGA TCCGAAGGAA
CTCAAGGACC ATCCGCTGCG CGTGGGCCTG TCGATGGAAG CCCGCGTCGA CATCCACGAT
GAGGGCGGCC AGAGCCTGGC CTCGACGCCG GCCACCCCGC CGCTGCAAAC CTCGGTGTAC
GACCAGGCCG GCCAGGAAGC CGATCAGGTC ATCGCCAGCA TCATCGCCAC CAACGCCGGC
CGCGGGACCG CCAGCGCACC GGCCGGCGCC GGTGCGATCG CCCCCGCTTC GTCGTCGCGC
GCGGCACAAC CCGCCCCCAA GGTCTGA
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| Protein sequence | MSDNTPQAAP SAAPAPAAPA AIPNGSGNGK RKRMLTTLAA ALVVAGVGYG LYWGLYGRWF
ESTDDAYVQG NVVQVTPQVA GTVVAIRADD TQLVTAGQPL IELDRADARV ALEQAEAALA
QAVRQVRTLY SNTGAYTSTL AMRESDLAKA KEDLARRKQI AGTGAVSQEE IAHAQTSLQA
AEAAVETARE QLQANRVLTE QTTLERHPNV LQAAAKVREA YLAYARTSLP ASVTGYVAKR
SVQVGQRVAP GTPLMAIVPL DQLWVDANFK EVQVRHMRVG QPVELVADVY GSSVTYHGKV
VGFSAGTGSA FSLLPAQNAT GNWIKVVQRL PVRVSLDPKE LKDHPLRVGL SMEARVDIHD
EGGQSLASTP ATPPLQTSVY DQAGQEADQV IASIIATNAG RGTASAPAGA GAIAPASSSR
AAQPAPKV
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