| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1291 |
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| Symbol | truB |
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| ID | 1220114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1375283 |
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| End bp | 1376227 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637237668 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | NP_519412 |
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| Protein GI | 17546010 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.227253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC AACGCCCGTC CCAACAGGCG AAGCAGCCGC GCCGCGACGT GCACGGCGTG
CTGCTGCTGG ACAAGCCGAT CGGCTGGTCG AGCAACGATG CGCTGATCCG CGCCAAGCGC
CTGCTGTGGG CCAAGAAGGC CGGGCATACC GGGACGCTCG ATCCGCTGGC GACCGGCCTG
CTGCCGTTGT GCTTCGGCGA GGCGACCAAG TTCTCGCAAG ACCTGCTCGA GGCCGACAAG
ACGTACGAGG CCGTGGTGCG CCTGGGCATC CGGACCAGCA CGGCGGATGC CGAGGGCGAG
GTGCTGAGCG AGCGGCCCGT GGCGGTGACG CCCGAGCAGT TGCGCGCCGC CATCGGCCGC
TTCGTCGGCG AGATCGACCA GGTGCCGCCG ATGCATTCGG CGCTGAAGAA GGACGGCAAG
CCGCTGTACG AATACGCGCG CGCCGGCCAG ACGGTCGAGC GCGCGGCGCG CCGGGTGACC
ATCCGCGCCA TCGACGTATT GGCCACCGAT CTCGATGCCG CCGCGCCGAC GGTGACCTTG
CGCGTGTGCT GCAGCAAGGG CACCTACATC CGCACGCTCG GCGAGGATCT CGGCGAGGCG
CTGGGCTGTG GCGCCCACCT CGTCGCGTTG CGCCGCACGC AGGTCGGCAG CCTCACGCTG
GACGGCGCGG TGACGCTGGA AGCGCTGGAG GCGGCGTCCG AGGACCAGCG TGCCGCGCTG
CTGGCGCCGG TCGATGCGTT GCTGCAGACC TTGCCGCGCG TCGAGCTCGG CGCCGAGGAC
AGCCGCCGCT TCCTGCACGG GCAGCGCTTG CCGCTGCAGC TGTCGCTGCC CAGTGCGGAG
CAGGTGCGGG TCTATGGCGC GCGTGGCGAG GCCGGTGCCT CGCTGCTGGG CGTGGCGGCG
TGGCAGGGCG GCGTGCTGCG GCCTGAACGC CTCGTGCATC TCTGA
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| Protein sequence | MTEQRPSQQA KQPRRDVHGV LLLDKPIGWS SNDALIRAKR LLWAKKAGHT GTLDPLATGL
LPLCFGEATK FSQDLLEADK TYEAVVRLGI RTSTADAEGE VLSERPVAVT PEQLRAAIGR
FVGEIDQVPP MHSALKKDGK PLYEYARAGQ TVERAARRVT IRAIDVLATD LDAAAPTVTL
RVCCSKGTYI RTLGEDLGEA LGCGAHLVAL RRTQVGSLTL DGAVTLEALE AASEDQRAAL
LAPVDALLQT LPRVELGAED SRRFLHGQRL PLQLSLPSAE QVRVYGARGE AGASLLGVAA
WQGGVLRPER LVHL
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