| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1289 |
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| Symbol | infB |
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| ID | 1220112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1371888 |
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| End bp | 1374782 |
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| Gene Length | 2895 bp |
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| Protein Length | 964 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237666 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | NP_519410 |
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| Protein GI | 17546008 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0908085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.772813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGCA CAACAGTTGC CCAACTCGCT GGCGAACTGA ACCGTAGCGC AGCCGCGCTG
CTGGAGCAGT TGCAGGCCGC GGGCGTGCAA AAGGCGACGC CCGAAGACGT CATCACCGAA
TCGGACAAGA CGCGTCTGCT CGACTATCTG AAGCGGGCTC ACGGCAGCGC CGAGGATGGC
GCGCGCAAGA AGATCACGCT CACCAAGCGC GAGACCAGCG AAATCCGCCA GGCGGACGCC
ACCGGCAAGA CTCGCACCGT GCAGGTCGAG GTGCGCAAAA AGCGCGTGCT GATGAAGCGC
GATGAGGCGG GTGCCGCGCC GGCCGAGGCG GAAGCCCCGG CACCGGTCAC TGCTCCGGTG
GTCGACGTCG AGGAAGTCGC GCGCCGCGAG GAAGAACAGC GTCGTCAGGC CGAACTGCTG
GCGCGCCAGG AGGCCGAGCT GAAGGCCCGC CAGGAGGCGA TGGAGCGCGA GGAAGCCGAG
CGCCGCGCCC GCCAGGAGGC GGCCGAAGCC GAGCAGCGTC GCCAGGCCGA ACTCGCCGCC
AAGAAGGCGG AAGAGGAGGC CGCAGCTGCC CGCGCTGCAG CGGAAGCGTC GGACGAAGCC
CCGCGCCGCA AGGCGGAAGA GGATGCCGCG CGTCTGGCCA GCGAGCGTGA AGCTGCGCAG
AAGGCCGCCG AAGAGGCACG CGCCGCAGCC GACAAGATCA AGGCTGAGGA AGACGGTGCA
CGCAAGCGCC GCGAGGCGGC CGAGGCCGAG GCCCGCGCCA TCCGCGAAAT GATGAATGCG
CCGGCGCGCG TGCTGAAGAC GCCAGCCGAG CGCAAGGCCG AAGAGAAGAA GGCGGAGCAG
TCGGGTACGC TGCACAAGCC GGTCAAGGCG GCCGGCGAAG CGCGTCCCGC GCCCGCAGCC
AAGAAGGCGG CGGCTCCGGC TGCGGCCCCG GCGGCAACGC CGGCCGGCGA CAAGAAGGGC
GGCCGTGGCG GCAAGCCCGG CGGCTGGCAG GACGATGCGC GCGGCAACAA GCGCGGCGGC
CTGAAGACTC GTGGCGACAC GGGCGGCGGC GTCGACGGCT GGCGTGGCTC CAAGGGCGGC
CGCAACCGCC ATGGCGACGA CAACCGCAAC GCCTTCCAGG CGCCGACCGA GCCGGTCGTG
CGTGAAGTGC ACGTGCCGGA AACCATCTCC GTGGCCGAAC TGGCGCACAA GATGGCGGTC
AAGGCGGCCG AGGTCATCAA GCAGATGATG AAGCTCGGCC AGATGGTCAC GATCAACCAG
GTGCTGGACC AGGAGACCGC GATGATCGTG GTCGAGGAAA TGGGCCACCA GGCGGTCGCG
GCCAAGCTGG ACGATCCGGA AGCGCTGCTG GTCGAAGGGG TGCAGGAGCA GCAGAACGTC
GAGGCCGAGG CCCGCCCGCC GGTCGTGACC GTGATGGGCC ACGTCGACCA CGGCAAGACC
TCGCTGCTGG ACTACATCCG TCGCGCCAAG GTGGCGGCGG GCGAAGCCGG CGGCATCACG
CAGCACATCG GCGCTTATCA CGTCGAAACG CCGCGCGGTG TCATCACGTT CCTGGACACG
CCGGGTCACG AGGCCTTCAC GGCCATGCGT GCGCGCGGCG CCAAGGCGAC CGACATCGTG
ATCCTGGTGG TGGCCGCCGA CGACGGCGTC ATGCCGCAGA CGAAGGAAGC CATCGCCCAT
GCGAAGGCGG CCGGTGTGCC CATCGTGGTG GCGATCAACA AGATCGACAA GCCCGAGGCC
AACCCGGATC GCGTCAAGCA GGAGCTGGTC AGCGAGAGCG TGATTCCGGA AGAGTACGGC
GGCGATTCGC CGTTCGTGCC GGTGTCGGCC AAGACCGGCC AGGGCATCGA GAACCTGCTG
GAAAACGTGC TGCTGCAGGC TGAAGTGCTG GAACTGAAGG CGCCCATCAA CGCGGCGGCC
AAGGGCCTGG TGGTGGAAGC CCAGCTGGAC AAGGGCAAGG GTCCGATCGC CACGGTGCTG
GTGCAGAGCG GTACGCTCAA GCGCGGCGAC GTGGTGCTCG CGGGCACGGC CTATGGCCGC
GTGCGCGCCA TGCTGGACGA GAACGGCAAG CCGGCCAAGG AAGCCGGTCC GTCGATTCCG
GTGGAAATCC AGGGCCTGTC GGAAGTGCCG GGCGCTGGCG AGGAAGTCAT CGTGCTGCCG
GACGAGCGCA AGGCGCGCGA AATCGCGCTG TTCCGCCAGG GCAAGTTCCG CGACGTCAAG
CTGGCGCGCC AGCAGGCCGC CAAGCTCGAG ACCATGCTGG AGCAGATGAG CGAAGGCGAG
GTCAAGACGC TGCCGCTGAT CATCAAGGCC GACGTGCAGG GCTCGCAGGA AGCGCTGGTG
CATGCGCTCA ACAAGCTGTC GACCGGCGAA GTGCGCGTGC AGGTCGTGCA CGGTGCGGTG
GGTGGCATCA GCGAATCCGA CGTCAACCTG GCGACCGCGT CGAAGGCCGT CATCATCGGC
TTCAACACGC GGGCCGATGC CGGGGCGCGC AAGCTGGCCG AGCATCAGGG CATCGACATC
CGCTACTACA ACATCATCTA CGACGCCGTG GATGAGGTGA AGGCGGCGAT GTCGGGCATG
CTGTCGCCGG AGAAGAAGGA AGAGACCACG GGCCTCGTCG AGGTGCGCCA GGTCTTCCAC
GTGCCGAAGG TGGGCGCGGT GGCCGGCTGT ATGGTGCTGG ACGGTGTCGT CAAGCGTTCG
TCGCTGGTCC GTGTGCTGCG CGAGAACGTG GTCATCTTCT CGGGCGAGCT GGAGTCGCTC
AAGCGCTTCA AGGACGACGT GAAGGAAGTG AAGCAAGGCT TCGAGTGCGG CCTGTCGATC
AAGAACTTCA ACGACGTCAA GGAAGGCGAC CAGCTGGAGA TCTACGAGAT CACCGAGGTG
GCGCGTACGC TGTAA
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| Protein sequence | MASTTVAQLA GELNRSAAAL LEQLQAAGVQ KATPEDVITE SDKTRLLDYL KRAHGSAEDG
ARKKITLTKR ETSEIRQADA TGKTRTVQVE VRKKRVLMKR DEAGAAPAEA EAPAPVTAPV
VDVEEVARRE EEQRRQAELL ARQEAELKAR QEAMEREEAE RRARQEAAEA EQRRQAELAA
KKAEEEAAAA RAAAEASDEA PRRKAEEDAA RLASEREAAQ KAAEEARAAA DKIKAEEDGA
RKRREAAEAE ARAIREMMNA PARVLKTPAE RKAEEKKAEQ SGTLHKPVKA AGEARPAPAA
KKAAAPAAAP AATPAGDKKG GRGGKPGGWQ DDARGNKRGG LKTRGDTGGG VDGWRGSKGG
RNRHGDDNRN AFQAPTEPVV REVHVPETIS VAELAHKMAV KAAEVIKQMM KLGQMVTINQ
VLDQETAMIV VEEMGHQAVA AKLDDPEALL VEGVQEQQNV EAEARPPVVT VMGHVDHGKT
SLLDYIRRAK VAAGEAGGIT QHIGAYHVET PRGVITFLDT PGHEAFTAMR ARGAKATDIV
ILVVAADDGV MPQTKEAIAH AKAAGVPIVV AINKIDKPEA NPDRVKQELV SESVIPEEYG
GDSPFVPVSA KTGQGIENLL ENVLLQAEVL ELKAPINAAA KGLVVEAQLD KGKGPIATVL
VQSGTLKRGD VVLAGTAYGR VRAMLDENGK PAKEAGPSIP VEIQGLSEVP GAGEEVIVLP
DERKAREIAL FRQGKFRDVK LARQQAAKLE TMLEQMSEGE VKTLPLIIKA DVQGSQEALV
HALNKLSTGE VRVQVVHGAV GGISESDVNL ATASKAVIIG FNTRADAGAR KLAEHQGIDI
RYYNIIYDAV DEVKAAMSGM LSPEKKEETT GLVEVRQVFH VPKVGAVAGC MVLDGVVKRS
SLVRVLRENV VIFSGELESL KRFKDDVKEV KQGFECGLSI KNFNDVKEGD QLEIYEITEV
ARTL
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