| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1286 |
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| Symbol | |
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| ID | 1220109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1367863 |
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| End bp | 1369659 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637237663 |
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| Product | hypothetical protein |
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| Protein accession | NP_519407 |
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| Protein GI | 17546005 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0722025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCCG ATGCCAATGC AGCGGCGCCT CGCCAGGATG GCGCCGGAGA GGGCGAGGAA
TCGTCCGCGC CGCGCCGCAA GGGTCTGCGC CGCGGCCTGC GCAACCTAGT CGCCGCGCGG
CGGCAGCAGC ATGAGGGCCG CGCCGAAAGC GAGCCCGCGG GCGAGGGTGC GGCGAGCGCC
GGCGAAGGCG CGCAAGCGCC GCGCAAGGCT CGCGCACCGC GCAGCCGCAA GCCGAAAGAG
GCGAATGCCG CAGCGGGCGA GGTTGTGGCC ATTCCGGAGG CGATGAGTTT GTCGGCGGAA
GGGCGGCCGT CCGCGGCGGA GGCCTCGGCC GAGCGTCGGG GAGCGCGTGG CCGCTTCGGC
AAGGGCCGCC GCCAGGCTGA GGGCCAGCCG GCCGGCGATC GCGCGGAAGG TCAGGGCGGC
AATGCCGGCG GCGGCAACGG CGGCCGGGGT AAGAACGCCC GCCCGACCCG TGGCGCCAAG
GGGCAAGGCA AGGCGGCCGG CCAGAGCCGG GGCAAGGGCG GCAAGGGTGC CGAGGACGTC
TTCCAGTACG TGATTTCCGG CGCCTATGAT GCTGACGCGG ATGTGGGCGG CGCGCCGCAG
TCGACCAAGG TGCGCGAACT CACTGCCGAG GACGACGCCC CGAAGCTGCA CAAGATTCTC
GCCGATGCGG GCCTGGGCTC GCGTCGCGAC ATGGAAGACC TGATCCTGCA GGGCCGCGTC
TCCGTGAACG GCTTGCCGGC GCATATTGGC CAGCGCATCC TGCCGACCGA TCAGGTGCGC
GTCAACGGCA AGCTCATCCA GCGCAAGCTG CCGAGCAAGC CGCCGCGCGT GCTGCTGTAT
CACAAGCCGG CCGGCGAGAT CGTCAGCCAG TCTGATCCCG AGGGCCGTCC GACCGTGTTC
GATTCCCTGC CGCGCATGAA GACCGGCAAG TGGGTCGCCG TGGGCCGCCT GGACTTCAAC
ACCGAAGGCT TGCTGATCTT CACCACGTCG GGCGATATCG CCAATCGGTT CATGCATCCG
CGCTACGGCG TCGAACGTGA ATATGCGGTG CGCACGCTGG GCGAGCTGCC GGAGTCCGAC
CGCCAGAAAC TGTTGCAGGG CATCCGCCTG GATGACGGCG AAGCGAATTT CCTGCGCTGC
GCGGATGGCG GTGGTGAGGG CGTCAATCAC TGGTACCACG TCGCGCTCAC CGAAGGTCGC
AACCGCGAGG TCCGCCGCAT GTTCGAGGCC GTCAACCTGA CGGTGTCGCG CCTGATCCGC
ACGCGCTATG GCAGTTTCGT GCTGCCGCGC GGCCTCAAGC GCGGCCGCTG GCAGGAGGTG
TCGGCCGAGG ATGTCCGGGG GCTGATGGGG TTGCTGGGCT TGAAAGTGCC TTCGGCAAGT
GCCAGCGGCG GCCAGGGTAG TCAGGGTGGC CGACAGGGTA ACCGTCGCCG CGAGGCGCAG
CCGGTGCTGA TGGGGCCGAT GTCGTCCGGC TTCACGGGCG AGGCGACGTT CCAGTCGCGC
GGCCAGGGTA TCGAAAACGG CAACCGTGCG ATGCCGGCTC CGCGTCGCCA GTCCAACCCG
CGTCAGCCGG ACCCGATGCA GACCTCGATG GGCTACATCA ACGTTGGCGG ACCGACCACG
CTGACCGCGC GGACCCGCAT GGGCGGTGGC CGTGGCCTGC CGGGTGCCGG CAGCAGCAAT
AGCGGTGGTA GCGGCAATGG CAACCGTGCG CCGGGCAACA AGCGTCCGGC CAAGGGCGGT
GGCGGCTTGC CGAACGGCAA CAAGGCGCGT GGCGGCGGCA AGCGCGGCAA GCGCTGA
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| Protein sequence | MSADANAAAP RQDGAGEGEE SSAPRRKGLR RGLRNLVAAR RQQHEGRAES EPAGEGAASA
GEGAQAPRKA RAPRSRKPKE ANAAAGEVVA IPEAMSLSAE GRPSAAEASA ERRGARGRFG
KGRRQAEGQP AGDRAEGQGG NAGGGNGGRG KNARPTRGAK GQGKAAGQSR GKGGKGAEDV
FQYVISGAYD ADADVGGAPQ STKVRELTAE DDAPKLHKIL ADAGLGSRRD MEDLILQGRV
SVNGLPAHIG QRILPTDQVR VNGKLIQRKL PSKPPRVLLY HKPAGEIVSQ SDPEGRPTVF
DSLPRMKTGK WVAVGRLDFN TEGLLIFTTS GDIANRFMHP RYGVEREYAV RTLGELPESD
RQKLLQGIRL DDGEANFLRC ADGGGEGVNH WYHVALTEGR NREVRRMFEA VNLTVSRLIR
TRYGSFVLPR GLKRGRWQEV SAEDVRGLMG LLGLKVPSAS ASGGQGSQGG RQGNRRREAQ
PVLMGPMSSG FTGEATFQSR GQGIENGNRA MPAPRRQSNP RQPDPMQTSM GYINVGGPTT
LTARTRMGGG RGLPGAGSSN SGGSGNGNRA PGNKRPAKGG GGLPNGNKAR GGGKRGKR
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