Gene RSc1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1284 
Symbol 
ID1220107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1365633 
End bp1366379 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content68% 
IMG OID637237661 
Producthypothetical protein 
Protein accessionNP_519405 
Protein GI17546003 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0623013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGG CAGCATTATT GAGTGTCTTT CTGATTGCGT TGCTCGGCGG CGTGCATTGC 
CTTGCCATGT GCAGCGGTAT TGCGCTTGCC GCGGAGCGCG CGCAGCCTGC CGTGCGCATC
GTTTCGCGTC GCCGGCTGTG GTTCGAGCAA CTGGTGATGC ATCTGGGGCG GCTCACCACT
TACGCGCTGC TCGGGGCCGC GATGGGCGCA CTCGGCGCGA CGGTGTGGCG GCAGCAGTGG
CTGCCCATCC AGCGTGGCCT GTTTGCGTTG GCGAGCGCGC TGTTGCTCGC CTATGGGTTG
CTTCTGCTGT CGCGCACGGC TGCCGATGTC TGGCGTGGCG CCTGGCTCGA ACGCATACTT
GGGCGCCTGT CCGGCGGGCT GGCGGCCGTT GCCTCGGGGG TGCGCGCGTC GTCGCTGCGT
GCGCGTTTTC CGTTGGCGGG CCGGTATCTG ACCGGGCTGG CCTGGGGGCT GGTGCCTTGT
GGCATGGTCT ATGGCGCGCT GGCCGTCGCG TTGCTGGCGG GCAACGCGGC ATCGGGGGCG
GTGGTCATGC TGGCGTTCGG CGCGGGCACG CTGCCGAACC TGCTGATGAT GTCGGGCGTG
GCCGGATGGT TGCGTGGCGT GTCGCGGATG CGCTGGGCTC GCGGTGTCGC GGGCATCGGA
ATCGCCGCAT TCGGCATCTG GGGACTCGTG TGTGCCGCGT GGCTGCCCGA GATGCTCAAC
GCACATGGAT TCTGCCTGGT ACTTTGA
 
Protein sequence
MSAAALLSVF LIALLGGVHC LAMCSGIALA AERAQPAVRI VSRRRLWFEQ LVMHLGRLTT 
YALLGAAMGA LGATVWRQQW LPIQRGLFAL ASALLLAYGL LLLSRTAADV WRGAWLERIL
GRLSGGLAAV ASGVRASSLR ARFPLAGRYL TGLAWGLVPC GMVYGALAVA LLAGNAASGA
VVMLAFGAGT LPNLLMMSGV AGWLRGVSRM RWARGVAGIG IAAFGIWGLV CAAWLPEMLN
AHGFCLVL