| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1264 |
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| Symbol | ugpB |
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| ID | 1220087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1343321 |
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| End bp | 1344637 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637237641 |
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| Product | glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide |
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| Protein accession | NP_519385 |
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| Protein GI | 17545983 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.400828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.517414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATCC GGAAGATTGC GGGGGCAGTG GCCGTGCTGG CGGCCTGCAC GTTTGCGCAG
GCCGCGCATG CCGTGACCGA GATTCAGTGG TGGCACTCGA TGGAGGGCGC CCTGAACGAC
AAGGTGAACG AGCTTGCCAA CAAGTTCAAC GCCAGCCAGC CCGACTACAA GGTCGTGCCC
GTCTACAAGG GCCAGTACGA CGAATCGCTG GCCGCCGGCA TCGCGGCCTT CCGCGCCGGC
AACGCGCCGG CCATCCTGCA GGTCTTCGAG GTCGGCACCG CGACCATGAT GAACGCCCGC
GGCGCCATCG TGCCGATCGC CAAGGTGATG AAGGACGCCG GCGAGAAGTT CGACCCCAAG
GCCTACGTGC CGGCGGTGGC GGGCTACTAC ACGTCGAACA AGGGAGACAT GCTGTCGTTC
CCGTTCAACA GCTCGACGAC GATCCTGTAC TACAACAAGG ACGCCTTCAA GAAGGCCGGC
CTCGACCCGA ACAAGCCGCC CGCGACGTGG CAGGAGGTCG CCATCGACGC GGCCAAGCTC
AAGGCGGCCG GCTTCGCGTG CGGCTACACC ACCGACTGGC AGTCGTGGGT GCACCTGGAG
AGCTTCTCGG CGTGGCACAA CGTGGCGTTC GCGACCGAGA ACAACGGCTT CGGCGGCGCG
AAGGCGCGCC TGATCTTCAA CGGTCCGGTG CAGGTGCAGC ACATCGAGCA TCTGCTCGAC
ATGGAGAAGA AGGGCTACTT CACCTATGCC GGCCGCAAGG ACGAGCCCAA GGCCAAGTTC
ATCGCGGGCG AGTGCGCCAT GCACACCGGC TCGTCGGCGG CGCTGGCCAA CATCCGCAAG
AACGCCAGGT TCAGCTTCAG CCCCGCGCCG CTGCCGTACG AGGCGGGCGT GCCGGGCGCG
CCGCAGAACA CCATCATCGG CGGCGCCTCG CTGTGGGTGA TGGGCGGCCA CAAGCCCGAA
GAGTACAAGG GTGTCGCCCG GTTCTTCTCC TTCCTGTCGC GCCCCGAGAT CCAGTCCGAC
TGGCACCAGT CGACCGGCTA CCTGCCGGTG ACGATGCAAG CGTACGAACT GACCCGGCAG
TCGGGCTTCT ATGACAAGAA CCCGGGCGCC GACGTGGCCG TCAAGCAGAT GATCGTCAGG
ACGACCGACA AGTCGCGCGG CATCCGCCTG GGCAACTTCC CGCAGATCCG CTCGGTGATC
GACGAAGAAC TCGAAGCCGT GTGGGCGGGC AAGAAGTCGC CGAAGGAAGC GCTGGACAGC
GCGGTCGCGC GCGGCAACGA TCTGCTGGCC CGCTTCGAGA AGACCGTCAA GGAGTAA
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| Protein sequence | MMIRKIAGAV AVLAACTFAQ AAHAVTEIQW WHSMEGALND KVNELANKFN ASQPDYKVVP
VYKGQYDESL AAGIAAFRAG NAPAILQVFE VGTATMMNAR GAIVPIAKVM KDAGEKFDPK
AYVPAVAGYY TSNKGDMLSF PFNSSTTILY YNKDAFKKAG LDPNKPPATW QEVAIDAAKL
KAAGFACGYT TDWQSWVHLE SFSAWHNVAF ATENNGFGGA KARLIFNGPV QVQHIEHLLD
MEKKGYFTYA GRKDEPKAKF IAGECAMHTG SSAALANIRK NARFSFSPAP LPYEAGVPGA
PQNTIIGGAS LWVMGGHKPE EYKGVARFFS FLSRPEIQSD WHQSTGYLPV TMQAYELTRQ
SGFYDKNPGA DVAVKQMIVR TTDKSRGIRL GNFPQIRSVI DEELEAVWAG KKSPKEALDS
AVARGNDLLA RFEKTVKE
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