Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1242 |
Symbol | |
ID | 1220065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1316844 |
End bp | 1318400 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637237619 |
Product | sugar ATP-binding ABC transporter protein |
Protein accession | NP_519363 |
Protein GI | 17545961 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATAG CCGTGTTGGA TCGGCCGATG TCCCGCCAGG ACACGCCGTC TGCTTCGTCA GTCCCGTCCG CCTGCGACTG CATGCTGGAA GTTCGTGGCG TCGGCAAATC CTTTCCCGGC GTGGTCGCGC TCGACGACGT GCGGCTGCGC GTGCGGCGCG GCACCGTTCA TGCGCTGATG GGCGAGAACG GTGCCGGCAA GTCCACGCTG ATGAAGATCA TTGCCGGCGT GCATGCGCCG GACAGGGGCG AGATCCGCCT CAAGGGCGAG CCGGTCGTGC TGCACGGCCC GCTCGACGCG CTCAATCGCG GCATTGCGAT GATCCATCAG GAACTGAACC TGATGCCGTA CATGACCGTG GCCGAGAACA TCTGGATTCG GCGCGAGCCC AGGAACCGCT GCGGCCTGGT CGATCACGCC GAACTGCGCC GGCGCACGCA GGCGCTGTTC GCGCGGCTGG CGATCGACAT CGACCCGGAG GCCGAAGTGC GCACGCTGAC GGTGGCAAGC CGCCAGATGG TCGAGATCGC GAAGGCCGTG TCGTTCGACT CCGAGGTGCT CATCATGGAT GAGCCGACGT CGGCGCTGAG CGATGTCGAA GTCCACCATC TGTTCCGCAT CATTCGCCAG CTGCGCGAGC AGGGCAAGGG CATCGTCTAC ATCACGCACA AAATGGACGA GCTGTTCGAG ATCGCCGACG AGTTCTCGGT GTTCCGCGAC GGCAAGTCCA TCGGCACGCA TGCGGCGAGC GACGTCACGC GCGACGACAT CATCCGCATG ATGGTCGGGC GCGAGATCAC GCAGATGTTT CCCAAGGCGG ATGTGCCGAT CGGCGACGTC GTGCTGTCGG TGAAGAACCT GTGCCTCCAC GGCGTGTTCC GCGACGTGAG CTTCGATTTG CGCGCGGGCG AGATTCTTGG CGTCGCGGGC CTGGTCGGCT CGGGGCGCTC GAACGTGGCG GAGGCGCTGT TCGGCGTCGT GCCGGCCAGC AGCGGCGAGA TCCGGCTCGA CGGCGAGCGG GTCAGCATCC GCACGCCCGC GCAGGCGATG CGGTACGGCA TGGCCTTCCT GACCGAAGAC CGCAAGGACA CGGGCTGCTT CCTGAACCTC GACCTGCTCG CCAACATGGA AGCCGCGGTG CTGCAGCGCC ACTACATGAC ATGCGGCTTC GTGCGGCGTG GCGCGCTGAA GCAGGATTGC GAGGCCATGA GCCGCACGCT GCGGGTGAAG TCGCCGGGGC TGCACGAAGA AATCCAGAAC CTGTCGGGGG GCAACCAGCA GAAGGTGCTG ATCGGCCGCT GGCTGCTGAC CCACCCGCGG ATCCTGATCC TGGACGAGCC GACGCGCGGC ATCGATGTCG GCGCGAAAGC CGAGATCCAC CGTCTCGTGA GCGCGCTGGC GGGCGAGGGC GTGGCGGTGC TGATGATCTC GTCGGAGATG CCGGAAGTGC TGGGCATGAG CGACCGGATC ATGGTCATGC ACGAAGGCCG CGTGACCGGC ATCGTCGATC GCAAGGACGC GAGCCAGGTC CGGGTCATGG AACTGGCTTC CCGCTGA
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Protein sequence | MSIAVLDRPM SRQDTPSASS VPSACDCMLE VRGVGKSFPG VVALDDVRLR VRRGTVHALM GENGAGKSTL MKIIAGVHAP DRGEIRLKGE PVVLHGPLDA LNRGIAMIHQ ELNLMPYMTV AENIWIRREP RNRCGLVDHA ELRRRTQALF ARLAIDIDPE AEVRTLTVAS RQMVEIAKAV SFDSEVLIMD EPTSALSDVE VHHLFRIIRQ LREQGKGIVY ITHKMDELFE IADEFSVFRD GKSIGTHAAS DVTRDDIIRM MVGREITQMF PKADVPIGDV VLSVKNLCLH GVFRDVSFDL RAGEILGVAG LVGSGRSNVA EALFGVVPAS SGEIRLDGER VSIRTPAQAM RYGMAFLTED RKDTGCFLNL DLLANMEAAV LQRHYMTCGF VRRGALKQDC EAMSRTLRVK SPGLHEEIQN LSGGNQQKVL IGRWLLTHPR ILILDEPTRG IDVGAKAEIH RLVSALAGEG VAVLMISSEM PEVLGMSDRI MVMHEGRVTG IVDRKDASQV RVMELASR
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