| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1222 |
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| Symbol | |
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| ID | 1220044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1291796 |
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| End bp | 1293139 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637237598 |
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| Product | hypothetical protein |
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| Protein accession | NP_519343 |
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| Protein GI | 17545941 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0015724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCACAT CGGCGCGAGG CCTGTGGCAC CGCCTGCGCG TGCTGCTTTC GCTGAACGAC
CCGCGTTGGG GGCGTGGCGA TGACAACAAC GCCGAGCGTG AAGACAAGGA CGATCCGAAG
CGCCAAAGCA AGCCGCCCCA GGATGGCCCG CCCGACCTGG ACGAGCTGTG GCGCGACTTC
AACCGCCGTC TGAACAATCT GTTCGGCCGC AAGGAAGGCG GCAACGGTAA TGGCCCGACG
CCGCTGCGTC CCGGCAACGG CCGTGCGGGC TCCGGCCTGG GCGTCGGCGT GCTGCTGGCG
GTGCTGGCGG TGCTGTGGCT GGCCAGCGGC TTCTTCATCG TGCAGGAAGG CCAGACCGGC
GTGATCCTGC AGTTCGGCCG CTTCAAGTAT CAGGCGACCC CGGGCATCAA CTGGCGCTTG
CCGTATCCGA TCGAGACGCA CGAGATCGTC AACCTGTCGG GCGTGCGCAC GCTGGAGATC
GGCCGCACCA CGCAGATCAA GGACACCAAC CTGAAGGATT CGTCGATGCT CACGCAGGAC
GAGAACATCG TCGACGTGCG TTTCTCGGTC CAGTACAACA TCGCCGATCC GGTCGAATAC
CTGTTCTACA ACCGTACCGA TCAGCGCGGC GACGAGGAGC TCGTGACGCA GGCGGCGGAG
ACGTCGGTGC GCGAGATCGT CGGCCGCAAC AAGATGGACG CCGTGCTGTA CGAAGGGCGC
GATGCGGTCG GCCGCAACCT GGCGGAATCG ATCCAGCGCA TCCTGTCGGC GTACAAGACC
GGCATCCGCA TCCTGAGCGT CAACGTGCAG AGCGTGCAGC CGCCCGAGCA GGTGCAGTCG
GCCTTCGATG ACGTGACCAA GGCCGGGCAG GATCGCGAGC GCGCGATCTC CGAGGGCCAG
GCCTATGCCA ACGACGTGGT GCCGCGCGCC AAGGGCACGG CCGCGCGCCT GGGCGAGGAG
GCGCAGGGCT ACAAGGCCCG CGTGGTCGCC CGCGCGGAAG GCGATGCCGC CCGCTTCGCG
TCGGTGCAGC GCGAATACGC GAAGGCGCCG CAGGTCACGC GCGATCGCAT TTACCTGGAA
ACGATGCAGG ACATCTACGC CAACGCGACC AAGGTGCTGG TCGACCAGAG CGGCAACGGC
AACCTGCTGT ACCTGCCGCT CGACAAGCTG ATCGCCCAGT CGCAGACCGG CGACGCGGCG
CGTACGCAGC CGGTGCCCGG CGCGTCGCCG CAGGACAGCG GCTCGGCGCA GGGCATGCCT
ACGCCCTCCA ATCCGTCGTC GATGAGCGAC GCCGACTCGC GCTCGCGCGA GGCGCTGCGT
AATCGCGAAC GCGATTCCCG TTAA
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| Protein sequence | MPTSARGLWH RLRVLLSLND PRWGRGDDNN AEREDKDDPK RQSKPPQDGP PDLDELWRDF
NRRLNNLFGR KEGGNGNGPT PLRPGNGRAG SGLGVGVLLA VLAVLWLASG FFIVQEGQTG
VILQFGRFKY QATPGINWRL PYPIETHEIV NLSGVRTLEI GRTTQIKDTN LKDSSMLTQD
ENIVDVRFSV QYNIADPVEY LFYNRTDQRG DEELVTQAAE TSVREIVGRN KMDAVLYEGR
DAVGRNLAES IQRILSAYKT GIRILSVNVQ SVQPPEQVQS AFDDVTKAGQ DRERAISEGQ
AYANDVVPRA KGTAARLGEE AQGYKARVVA RAEGDAARFA SVQREYAKAP QVTRDRIYLE
TMQDIYANAT KVLVDQSGNG NLLYLPLDKL IAQSQTGDAA RTQPVPGASP QDSGSAQGMP
TPSNPSSMSD ADSRSREALR NRERDSR
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