| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1195 |
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| Symbol | |
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| ID | 1220017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1263160 |
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| End bp | 1264665 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237571 |
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| Product | hypothetical protein |
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| Protein accession | NP_519316 |
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| Protein GI | 17545914 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.282348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.538855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCCCCG TTTACCATGG CGGAGTTTCC GCCCGCCCGG GCACAAGCCT GGAATTCTAC
CGGCTGCCCC TGTCGCCGAG CCCCATGCCC TTGCTGTTTC CCCGCCAGAT CGCCCGCCCT
TTGCCCCGGC ACACGGAACG TGCCGCCGCC CGCCGCCTGC GCAACACCCT TGCGGCCCTC
GCGCTCGGCC TGGGCCTGCA CGGCACGGCA CTGGCCGATC CGGCCGCCCC CAATGCCCCC
GAGCCCGCGG CCACGCAAGA CCTGCCCGAG CCGCAGCCGT GGAATCTGCA TGGGCAATTC
ACTAGCGTCA CGCAGTGGCA CCCCGCCTTC AGCGCGCGCT ACAGCGGCCC CAACAGCCTG
GCGCCCGCCA GCGAAGACCG CGCAACGACG GACCTGACCC TGTTCCTCGG CGTGCGCCTG
TGGAAGGGCG CCGAGCTGTA TGCAAACCCG GAGATCGACC AGGGTTTCGG TCTGAACAAC
ACGCTGGGCA TGGCCGGCTT TCCGAGCGCC GAAGCGTACA AGGTCGGCAA GAACGATCCG
TACCACAAGC TGCCTCGCCT CTTCCTGCGG CAGGTCATCG ACCTCGGCGG CGCGCCGCAG
GCGATGGAGT CGGCGCCCAA CCAGCTCGGC GGGACCCGCG CGGCGGACAA CCTGACCCTC
ACCATCGGCA AGTTCTCGGT AATCGACATC TTCGACACCA ATGCCTACGC GCACGATCCG
CGCGGGGATT TCCTGAACTG GTCCGTGGTC GATGCCGGCG CATTCGATTA CGCGGCCGAT
GCCTGGGGCT ATACCCATGG CGCGGCGGTG GAATGGACCC AGTCGTGGTG GACGGTCCGC
GGCGGCTTCT TCGCGCTGTC GAAGGTGCCG AACAGCGCGA CGATCGACAC GTCGTATAAG
CAATACGCCT GGGTCGGCGA ATTCGAAGCG CGCCATCAGT GGCTCGGGCG CCCCGGCAAG
GTCAAGCTGC TCGCCTTCGC CAACCGCGCC AGGATGGGTG GCTACGGCGA TGCCCTGAGC
CTCGCGCAGC AGACCGGGGA CACCCCCGAT ACGTCCCTCG TCCGGCACCT CGCGTGGCGC
GCCGGCATCG CGCTGAACGT GGAGCAGGAG CTGGCACCCG ATCTCGGCTT CTTCGCCCGC
GCCAGCATGA ACGACGGCAG CAAGGAAACG TACGAGTTCA CCGACATCAA CCGGTCCGTC
TCCGCCGGCT TCTCGCTCAA GGGCGACCGC TGGGGCCGCC ACGACGACAC GGTGGGCGTG
GCGGTCGTGG TCAACGGCCT GTCACGCGCG GCGCGGCGGT ATTTCGAGGC CGGCGGCCTG
GGCGTGCTGA TCGGCGACGG CGCGCTGAAC TACGGCACGG AGCGCATCGC CGAGCTGTAC
TACAACTGGG CCGCGATGCG GCACCTCACG CTCGGTCTCA ACTACCAGTA TGTGGTGCAC
CCCGCCTACA ACCGGGATCG GGGCCCGGTG TCCATCGTGG GCCTGCGGGT TCACGCGGAT
TTCTGA
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| Protein sequence | MRPVYHGGVS ARPGTSLEFY RLPLSPSPMP LLFPRQIARP LPRHTERAAA RRLRNTLAAL
ALGLGLHGTA LADPAAPNAP EPAATQDLPE PQPWNLHGQF TSVTQWHPAF SARYSGPNSL
APASEDRATT DLTLFLGVRL WKGAELYANP EIDQGFGLNN TLGMAGFPSA EAYKVGKNDP
YHKLPRLFLR QVIDLGGAPQ AMESAPNQLG GTRAADNLTL TIGKFSVIDI FDTNAYAHDP
RGDFLNWSVV DAGAFDYAAD AWGYTHGAAV EWTQSWWTVR GGFFALSKVP NSATIDTSYK
QYAWVGEFEA RHQWLGRPGK VKLLAFANRA RMGGYGDALS LAQQTGDTPD TSLVRHLAWR
AGIALNVEQE LAPDLGFFAR ASMNDGSKET YEFTDINRSV SAGFSLKGDR WGRHDDTVGV
AVVVNGLSRA ARRYFEAGGL GVLIGDGALN YGTERIAELY YNWAAMRHLT LGLNYQYVVH
PAYNRDRGPV SIVGLRVHAD F
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