Gene RSc1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1179 
SymbolgltX 
ID1219995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1239959 
End bp1241461 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content66% 
IMG OID637237549 
Productglutamyl-tRNA synthetase 
Protein accessionNP_519300 
Protein GI17545898 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.96044e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.265022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAAAGT TCGGCGGCGG ACCGGTCGGG CGCACAGGAT GCGGTTGCTA TAATTTCCGT 
TTTGACAGAG GCCGCCTTCG CGGCCTTGTC CGTTCGGCCA TTCCTATGAC TCAGCGCGTC
CGCACCCGTT TCGCTCCCAG CCCCACCGGT TTCATCCACC TCGGCAACAT CCGTTCGGCC
CTGTATCCGT GGGCGTTCGC CCGCAAGATG AAGGGCGATT TCATCCTGCG CATCGAAGAT
ACCGACGTGG AGCGCTCGAC CCAGGAGGCC GTCGATGTGA TCCTGGAAGC GATGGATTGG
CTGGGCCTGG ATATCGACGA AGGGCCGTTC TACCAGATGC AGCGCATGGA CCGCTATCGC
GAGGTCATCG CACAGATGGT CGCGCAAGAC CTGGCCTACC CGTGCTACAT GAGCACCGAG
GAACTCGACG CCCTGCGCGA AGCCCAGCGC GTGCGCGGCG AGAAGCCCCG GTACGACGGC
ACCTGGCGTC CCGAGCCAGG CAAAGTCCTG CCGACGCCGC CGGCCGGCGT GCAGCCGGTG
ATCCGCTTCA AGAACCCGAT CGGCGGCAGC GTGGTGTGGG ACGATGCGGT CAAGGGCCGC
ATCGAGATCT CCAACGACGA GCTCGACGAT CTCGTCATCG CGCGTCCGGA TGGCACGCCC
ACCTACAACT TCTGCGTGGT GGTCGACGAT ATGGACATGC GTATCACCCA TGTGATCCGC
GGCGACGATC ACGTCAACAA TACGCCGCGC CAGATCAATA TCCTGCGCGC GCTGGGCGGC
ACGCCGCCCA TCTATGCCCA CCTGCCGACG GTGCTGAACG AGCAGGGCGA GAAGATGAGC
AAGCGGCACG GCGCCATGAG CGTGACCGGC TACCGCGATG CGGGCTACCT GCCCGAAGCC
GTCGTCAACT ACCTGGCCCG CTTGGGCTGG GCGCACGGCG ACGCGGAAAT CTTCTCGCGC
GAGCAGTTCG TCGAGTGGTT CGACCTGGAG CACCTGGGCA AGTCGCCGGC GCAGTACAAC
CCCGAGAAGC TCGCCTGGCT GAACAACCAC TACATCAAGC AGGCCGACAA CGCGCGGCTG
GCAGAGCTGG TGAAGCCGTT CATCGAAGCG CTGGGCGGCC GCGTCGAGGG CGGTCCGCAG
CTGGCCGACG TGATGGCCTT GGTGAAGGAT CGCGCCAACA CGCTGCAGGA AGTCGCGCAG
ACGGCGCTGC TGTTCTATCG CACCGAGATC TCGGTGGCGC CGGAGCTGGC TGCGCAGCAT
CTCACCGATG AGGTGCGCCC GGGCATCATG GCCCTGGCCG ACAAGCTGGG GACGTTGCCC
GAGTGGAAGC GCGAGGCCAT CGGCGCGGCC TTCAAGGAGG TGTTGGGTGC CCACGGCTGG
AAGATGCCGA AGCTGGCAAT GCCGGTGCGG CTGCTGGTGG CCGGCCAGTT GCAGACGCCG
TCGATCGATG CGGTGCTGGA GCTGTTCGGC CGCGAGGTCG TGCTGCGCCG CCTGGCCGGG
TGA
 
Protein sequence
MPKFGGGPVG RTGCGCYNFR FDRGRLRGLV RSAIPMTQRV RTRFAPSPTG FIHLGNIRSA 
LYPWAFARKM KGDFILRIED TDVERSTQEA VDVILEAMDW LGLDIDEGPF YQMQRMDRYR
EVIAQMVAQD LAYPCYMSTE ELDALREAQR VRGEKPRYDG TWRPEPGKVL PTPPAGVQPV
IRFKNPIGGS VVWDDAVKGR IEISNDELDD LVIARPDGTP TYNFCVVVDD MDMRITHVIR
GDDHVNNTPR QINILRALGG TPPIYAHLPT VLNEQGEKMS KRHGAMSVTG YRDAGYLPEA
VVNYLARLGW AHGDAEIFSR EQFVEWFDLE HLGKSPAQYN PEKLAWLNNH YIKQADNARL
AELVKPFIEA LGGRVEGGPQ LADVMALVKD RANTLQEVAQ TALLFYRTEI SVAPELAAQH
LTDEVRPGIM ALADKLGTLP EWKREAIGAA FKEVLGAHGW KMPKLAMPVR LLVAGQLQTP
SIDAVLELFG REVVLRRLAG