| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1177 |
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| Symbol | |
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| ID | 1219993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1238189 |
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| End bp | 1238857 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637237547 |
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| Product | putative transmembrane protein |
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| Protein accession | NP_519298 |
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| Protein GI | 17545896 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0196017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.188955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCATT TCGTACTTCA TTCCATGGCG CGCCTGGCGG TGGGGGTTGT GATCGGCTGC
GGCGTGCTCG TCTCGAATGG AGTGCGCGCC GACACCGTGT TCAAGGACAC GGAAGTCCGC
GCCGATGCCA AGCCGGAAGC CAAGCCCGGG ATCTTTTCCT CCATGGTTGG CGCCACCTCC
GATGTGGTGA GCCGGACCGG CGACGTCGTC ATGAACGCGC TGGGCATGAT CGGCTTGCGC
TACCGGTTCG GCGGCAATAC GCCTGAATCG GGCCTCGACT GCAGCGGCTT TGTCCGCTAC
GTCTTCCACG ACACCTTCGG CTTCCTGCTG CCGCGTCGCG CGGTGGAGAT GAGCCGCGTC
GGCACCAGCG TTGACATGAA GGATCTGCGC CCCGGCGATC TGGTGTTCTT CAACACCATG
CACCGCACGT TCTCGCATGT GGCCATCTAC GTCGGCGACA ACAAAATGGT GCATGCGCCC
TCGACCGGCA GCAAGATCCG CGTCGATGAC ATGACCGCGT CGTACTGGGT GTCGCGCTAC
AACGGCGCGC GCCGCATCGA CTGGCAGGGC AACGGCCAGA TCAAGGAAGG CGCCGAGAAT
TTCGTCGAGC AGCTGCAGCG GATCGACCCG AACGCCGCCG GCAAGTCGCT CTCGATGTAC
GGCGGCTGA
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| Protein sequence | MQHFVLHSMA RLAVGVVIGC GVLVSNGVRA DTVFKDTEVR ADAKPEAKPG IFSSMVGATS
DVVSRTGDVV MNALGMIGLR YRFGGNTPES GLDCSGFVRY VFHDTFGFLL PRRAVEMSRV
GTSVDMKDLR PGDLVFFNTM HRTFSHVAIY VGDNKMVHAP STGSKIRVDD MTASYWVSRY
NGARRIDWQG NGQIKEGAEN FVEQLQRIDP NAAGKSLSMY GG
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