| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1171 |
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| Symbol | lysC |
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| ID | 1219986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1229452 |
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| End bp | 1230702 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637237540 |
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| Product | aspartate kinase |
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| Protein accession | NP_519292 |
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| Protein GI | 17545890 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000593821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.758494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTCA TCGTTCACAA ATACGGCGGC ACGTCGATGG GTTCGGTCGA ACGCATCAAG
AACGTCGCCA AGCGCGTCGC CAAGTGGCAC CGCGCCGGTC ACCAGATCGT GGTCGTGCCG
TCGGCCATGT CCGGCGAAAC CAACCGCCTG CTGGGCATGG CCAAAGAGAT TTCGGCCCAG
CCCGACCCGC GTGAACTCGA CATGATTGCC TCGACCGGCG AGCAGGTGAG CGTGGGGCTG
CTGGCCATCG CGCTGCATGC CGAAGGCATC GACGCGATCA GCTATACCGG CTGGCAAGTG
CCGGTGCAGA CCGATTCCGC CTACACCAAG GCCCGCATCC AGTCGATCGA CGACGAGCGC
GTGCGCGCCG ATCTCGAGGC CGGCCGCGTG GTCGTCATCA CCGGCTTCCA GGGCATCGAC
GGCGAAGGCC ACATCACCAC GCTCGGCCGC GGTGGTTCCG ATACGTCCGC CGTGGCGGTC
GCCGCCGCGC TGGAAGCGGA GGAGTGCCTG ATCTACACCG ACGTCGACGG CGTCTACACG
ACCGATCCGC GCGTGGTGGA CGACGCCCGC CGCCTGGACA AGATCACCTT CGAAGAGATG
CTGGAAATGG CCAGCCTCGG CTCCAAGGTG CTGCAGATCC GCTCGGTGGA GTTCGCCGGC
AAGTACCGCG TGAAGACCCG CGTGCTGTCG TCGCTGACCG ACCCGCTGAT GCCGCTCGAG
GTGGAAATGC ACTCGGGCAC GCTGATTACT TTTGAGGAAG ATTCGAACAT GGAAGCCGCC
GCCATTTCCG GCATCGCCTT TGCCCGCGAC GAAGCCAAGA TCACCGTGAT CGGTGTGCCG
GACAAGCCCG GCATCGCGTA CCAGATCCTG GGCCCGGTCG CCGACGCCAA CATCGACGTC
GACATGATCA TCCAGAACCA GTCGGTGGAC GGCAAGACGG ACTTCACCTT CACCGTGCCG
CGCGGCGACT ACCAGCGTGC GCTGGGCATC CTCAACGACA GCGTGAAGGG CCACATCGGC
GCCGCGAACG TGTCGGGCGA CCCGAAGGTG TCGAAGGTGT CGGTGGTGGG CGTGGGCATG
CGCTCGCACG TGGGCATCGC CAGCAAGATG TTCCGCACGC TGTCGGAAGA GGGGATCAAC
ATCCAGATGA TCTCCACCTC GGAGATCAAG ATCTCGGTGC TGATCGACGA GAAGTACATG
GAGCTGGCCG TGCGCGCGCT CCACAAGGCG TTCGAGCTGG ACCAGGCGTA A
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| Protein sequence | MALIVHKYGG TSMGSVERIK NVAKRVAKWH RAGHQIVVVP SAMSGETNRL LGMAKEISAQ
PDPRELDMIA STGEQVSVGL LAIALHAEGI DAISYTGWQV PVQTDSAYTK ARIQSIDDER
VRADLEAGRV VVITGFQGID GEGHITTLGR GGSDTSAVAV AAALEAEECL IYTDVDGVYT
TDPRVVDDAR RLDKITFEEM LEMASLGSKV LQIRSVEFAG KYRVKTRVLS SLTDPLMPLE
VEMHSGTLIT FEEDSNMEAA AISGIAFARD EAKITVIGVP DKPGIAYQIL GPVADANIDV
DMIIQNQSVD GKTDFTFTVP RGDYQRALGI LNDSVKGHIG AANVSGDPKV SKVSVVGVGM
RSHVGIASKM FRTLSEEGIN IQMISTSEIK ISVLIDEKYM ELAVRALHKA FELDQA
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