Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1162 |
Symbol | cysE2 |
ID | 1219977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1220911 |
End bp | 1221717 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237531 |
Product | O-acetylserine synthase |
Protein accession | NP_519283 |
Protein GI | 17545881 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1045] Serine acetyltransferase |
TIGRFAM ID | [TIGR01172] serine O-acetyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.973633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.323446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTTACA CTGCCCCCAA GCGCATCGCG CTGATCGATA TTCCGTTTTT TCACAGACCC ATGTTCACAC GCATTCGCGA AGACATCCGC GCCATCATGG AGCGAGACCC GGCCGCGCGC AGCCGCTGGG AAGTGCTGAC CTGCTATCCG GGCCTGCACG CCATCATCGT CCATCGGGCC GCGCATGCGT GTTGGGGCGC GGGCTTCAGG TGGCTGGGCC GATGGCTGTC GCACCTGGGC CGTTTCCTGA CCGGCATCGA AATCCACCCC GGCGCGCAGG TCGGCCGGCG CGTGTTCATT GATCACGGCA TGGGCGTCGT GATCGGCGAG ACCGCCGAGA TCGGCGACGA TTGCACGATC TACCAGGGCG TGACGCTGGG CGGCACCTCG CTCTACAAGG GCGCCAAGCG GCATCCGACG CTGGGCAAGG GCGTCGTGGT CAGCGCGGGC GCCAAGGTGC TCGGCGGGTT CGTGATCGGC GACGGCGCGC GGGTCGGCTC CAACGCGGTG GTGCTCAAGC CGGTGCCGGC CGGCGCCACG GCGGTCGGCA TTCCCGCCCG CATCCTCGAG CGCGACGTGC CGGGCGCGGT CCAGCCCGCA CTCAAGCAGG AGTTCTCGGC CTACGGCATC ACGCCGGACG CGGACGATCC GGTTTCGCTC GCGCTCAAGC GGCTGATCGA CCATAGCGCG CTCCAGCAGG AGCGCATCGA GTCCATCCTG AGCGCGCTGG ACCGCCTGGG CGCGCATCTC GAGAACTCGC CGAACGATCC GTTCGATGCC AGCGAGCTCA AGCGGATGCT GAAGTGA
|
Protein sequence | MPYTAPKRIA LIDIPFFHRP MFTRIREDIR AIMERDPAAR SRWEVLTCYP GLHAIIVHRA AHACWGAGFR WLGRWLSHLG RFLTGIEIHP GAQVGRRVFI DHGMGVVIGE TAEIGDDCTI YQGVTLGGTS LYKGAKRHPT LGKGVVVSAG AKVLGGFVIG DGARVGSNAV VLKPVPAGAT AVGIPARILE RDVPGAVQPA LKQEFSAYGI TPDADDPVSL ALKRLIDHSA LQQERIESIL SALDRLGAHL ENSPNDPFDA SELKRMLK
|
| |