| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1158 |
|---|
| Symbol | |
|---|
| ID | 1219973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 1217630 |
|---|
| End bp | 1218358 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637237527 |
|---|
| Product | glutamine amidotransferase |
|---|
| Protein accession | NP_519279 |
|---|
| Protein GI | 17545877 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.176082 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCG CGCTCGCCCT GCGTCACGTC CCGTTCGAGC ATCTGGGCGT CCTGGAATCG
CTGCTGCTCG GACGCGGCTA CGCGGTGCGC ACGCTCGACG CCGGCCTGCA GCCGCTGCCG
GCCGAAGCGC TGGCCGCGGC GGACCTGGTG GTGGTGCTGG GCGGCCCCAT CGGCGCCTTC
GACGATGATC GCTACCCCTT CCTGCGCGAG GAAACCGACG CCATCGCGCG GCGGCTGGCG
GCACGCAAGC CGCTGCTCGG CATCTGCCTG GGCGCGCAGC TGATGGCGCG CGCGCTGGGT
GCCGCCGTGG CGCCGATGGG CGACAACGTC AAGGAGATCG GCTTCGCGCC GTTGACGCTG
ACGGCCGAGG GCGCGGCCTC CCCGCTCGCG CCGCTGGCCG ACGGCACGCC CGTGCTGCAT
TGGCACGGCG ACCGGTTCGA GCTGCCGCCC GGCGCCACAC GGCTGGCATC CACATCGGTC
TGCGCGGAAC AGGCCTTTGC CCTGGGCGAC CACGCGCTCG GCCTGCAATT CCATCTGGAG
GCCGATCTGC GCGAACTCGA GGCCTGGCTG ATCGGGCATG CGGCCGAGCT GGCCGCCGCG
GGCATCGACC CGCGCACGCT GCGCGGGCAG GCCCCCGCGC TGGCCGCACC GCTGGCGCAG
CGCGCCCACG ATGTCTTCAC CGCGTGGCTG GATCGCGCCG AGGCTCACGC CGCGCGGAGC
GCCGCATGA
|
|---|
| Protein sequence | MKTALALRHV PFEHLGVLES LLLGRGYAVR TLDAGLQPLP AEALAAADLV VVLGGPIGAF
DDDRYPFLRE ETDAIARRLA ARKPLLGICL GAQLMARALG AAVAPMGDNV KEIGFAPLTL
TAEGAASPLA PLADGTPVLH WHGDRFELPP GATRLASTSV CAEQAFALGD HALGLQFHLE
ADLRELEAWL IGHAAELAAA GIDPRTLRGQ APALAAPLAQ RAHDVFTAWL DRAEAHAARS
AA
|
|---|
| |