| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1142 |
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| Symbol | |
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| ID | 1219957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1198159 |
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| End bp | 1198836 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237511 |
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| Product | integral membrane transmembrane protein |
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| Protein accession | NP_519263 |
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| Protein GI | 17545861 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1994] Zn-dependent proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCA CCGTCATCCA AACTCTCACG GTCTACGCGA TCCCCGTGCT GTTCGCGATC
ACCGTGCCGG CCGCCGCCCG TGGCTATCTC GCCAGGCACT ATGGAGACAA CACGGCGTTC
CTGGCGGGCC GGCTGAGTTT CAACCCGCTG CGCCATGTCG ATCCGATCGG TACGATCGCG
ATGCCGCTGC TGCTGTACTT CGTGACGGGG GGCGCGCTCG TATTCGGCTA TTCCAAGCCG
GTGCCGGTGG ATTTCAGCGC GCTGCGCGAT CCGCGCTGGC AGGGGCTGCG CGTGGCGCTG
GCCGCGCCGG AGACCAATTT CGCGATGGCG CTGGCCTGGG GGATGCTCGG GCTCACCCTG
GCCGCTGCCG GCATCGACGA GCGCTTCCTG ACGGGCATGG CGGCCGCCGG CGTCGGCGCC
AATCTCGCCA TGGTCGCGCT CAATCTCGTC CCGGTGCCGC CGCTGGATGG CGGCCGGGTG
CTGGCGGCGC TGCTGCCGCA GCGCCTGGCG CCGGTCTTCG CCCGTGTCGA GCAATATGGT
TTCTACATCG TCATGGCGCT GATCCTGACG GGCGTGCTGA CCCAGGTCTG GATGCGCCCG
GTCGCGGGGT TGCTGGCCAA GGCGCTGATG ATGGTCCTCA GTCCGCTTCA GGCGGCGCTT
TCCTGGTTCG TCTCCTAA
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| Protein sequence | MNPTVIQTLT VYAIPVLFAI TVPAAARGYL ARHYGDNTAF LAGRLSFNPL RHVDPIGTIA
MPLLLYFVTG GALVFGYSKP VPVDFSALRD PRWQGLRVAL AAPETNFAMA LAWGMLGLTL
AAAGIDERFL TGMAAAGVGA NLAMVALNLV PVPPLDGGRV LAALLPQRLA PVFARVEQYG
FYIVMALILT GVLTQVWMRP VAGLLAKALM MVLSPLQAAL SWFVS
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