Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1133 |
Symbol | |
ID | 1219948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1190810 |
End bp | 1191337 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237502 |
Product | hypothetical protein |
Protein accession | NP_519254 |
Protein GI | 17545852 |
COG category | [R] General function prediction only |
COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTCT ACCAACTCGG CGACGCCGTC CCGACCATTG ACGACGATGC CTATGTGGCG CCGGAGGCCA CCGTGATCGG CCGCGTGGTG CTCAAGGCAC GCTCGAGCGT GTGGCCGGGC GCGGTCATCC GCGGGGACAA CGAGCCGATC GTCGTGGGCG AAGCCAGCAA CGTGCAGGAA GGCGCCGTGC TGCATACCGA CCCGGGCTGC CCGCTCGACA TCGGCGACCG CGTGACGATC GGCCACCAGG CCATGCTGCA CGGCTGCACC ATCGGCGAGG GCTCGCTGAT CGGCATCCAG GCAGTGGTGC TCAACCGCGC GGTGATCGGC CGCGACTGCC TGGTGGGCGC CGGCGCGATC GTGACGGAAG GCAAGGTCTT CCCCGACCGG TCGCTGATCC TGGGCGCGCC GGCCAAGGCC GTGCGGGAAC TGACGGACGA CGACATCGCC AAGATGCGCC TCAACACCGA GACGTACGCG GTACGCCAGG CGATGTACAA GCAGCAATTG AAACGGATCG ATGGATGA
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Protein sequence | MALYQLGDAV PTIDDDAYVA PEATVIGRVV LKARSSVWPG AVIRGDNEPI VVGEASNVQE GAVLHTDPGC PLDIGDRVTI GHQAMLHGCT IGEGSLIGIQ AVVLNRAVIG RDCLVGAGAI VTEGKVFPDR SLILGAPAKA VRELTDDDIA KMRLNTETYA VRQAMYKQQL KRIDG
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