Gene RSc1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1133 
Symbol 
ID1219948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1190810 
End bp1191337 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content68% 
IMG OID637237502 
Producthypothetical protein 
Protein accessionNP_519254 
Protein GI17545852 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCT ACCAACTCGG CGACGCCGTC CCGACCATTG ACGACGATGC CTATGTGGCG 
CCGGAGGCCA CCGTGATCGG CCGCGTGGTG CTCAAGGCAC GCTCGAGCGT GTGGCCGGGC
GCGGTCATCC GCGGGGACAA CGAGCCGATC GTCGTGGGCG AAGCCAGCAA CGTGCAGGAA
GGCGCCGTGC TGCATACCGA CCCGGGCTGC CCGCTCGACA TCGGCGACCG CGTGACGATC
GGCCACCAGG CCATGCTGCA CGGCTGCACC ATCGGCGAGG GCTCGCTGAT CGGCATCCAG
GCAGTGGTGC TCAACCGCGC GGTGATCGGC CGCGACTGCC TGGTGGGCGC CGGCGCGATC
GTGACGGAAG GCAAGGTCTT CCCCGACCGG TCGCTGATCC TGGGCGCGCC GGCCAAGGCC
GTGCGGGAAC TGACGGACGA CGACATCGCC AAGATGCGCC TCAACACCGA GACGTACGCG
GTACGCCAGG CGATGTACAA GCAGCAATTG AAACGGATCG ATGGATGA
 
Protein sequence
MALYQLGDAV PTIDDDAYVA PEATVIGRVV LKARSSVWPG AVIRGDNEPI VVGEASNVQE 
GAVLHTDPGC PLDIGDRVTI GHQAMLHGCT IGEGSLIGIQ AVVLNRAVIG RDCLVGAGAI
VTEGKVFPDR SLILGAPAKA VRELTDDDIA KMRLNTETYA VRQAMYKQQL KRIDG