| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1115 |
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| Symbol | recJ |
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| ID | 1219930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1170912 |
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| End bp | 1172609 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637237484 |
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| Product | single-stranded-DNA-specific exonuclease protein |
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| Protein accession | NP_519236 |
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| Protein GI | 17545834 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00151931 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.274168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA TCGCCATCCG TCCGCATTCC GCCGAGACCG CCAGCCTGCT GGCCGGCCAC
GGCATCCATC CCATCCTGGC GCGCATCCTG GCCGCGCGCG GCGTGGCCCG ACCCAGCGAA
CTGTCGACCG AACTGACCGA CCTGCTGCCG CCCGCGCAGC TCAAGGGCAT CGACGACGCG
GCGCGCTACC TGGCCGACGC GATCGCCGCC GGCAAGCGCC TGCTGATCGT CGCCGACTAC
GACTGCGACG GCGCCACCGC CTGCGCGGTC GGCGTGCGCG GGCTGCGCAT GCTGGGCGCG
CAGGTCGGCT ACATCGTGCC CAACCGCTTC GAGTACGGCT ACGGCCTGTC GCCCGAGATC
GTCGCGCTGG CCGCGCGCGA GCGGCCGGAC GTGCTCGTCA CCGTCGACAA CGGCATCGCC
GACGTGGCGG GCGTGGCGGC GGCCAACGCG CTGGGCATCG ACGTCGTCGT CACCGATCAC
CACATGCCGG GCGCGCAGTT GCCCGAGGCC CGCGTGATCG TCAACCCGAA CCAGCCGGGC
TGCGGCTTTC CGAGCAAGCA CCTGGCGGGC GTGGGCGTGA TGTTCTACGT GTTGCTGGCG
CTGCGGGCCG AGCTGCGCAA CCGCGGCGCC TTCACGCCGC AGAACCAGCC ACGCCTCGAC
GCGCTGCTCG ACCTGGTGGC GCTCGGCACC GTGGCCGACG TGGTCCGGCT CGATGCCAAC
AACCGGCTGC TGGTGGCGCA GGGCCTCAAG CGCATGCGCG CGGGCCGGAT GTGCGCCGGC
ATCGCGGCGC TGTTCCGCGT GGCCGGGCGC GAGGCGCGGC GCGCATCCAC CTTCGACCTC
GGCTTCGGCC TGGGCCCGCG CCTGAACGCC GCCGGCCGCC TGGCCGACAT GTCGCTCGGC
ATCGAATGCC TGCTGACCGA TGATTTCGAC CGCGCCATGG CCATCGCCGC CGAGCTCGAC
GGCATGAACC GGGAGCGCCG CGAAATCGAG GCCGGCATGC AGCAGGAGGC CATGGCGATC
CTCGCGTCCA CGCTGGCCGG CATGGACGGC GCCGGCCGCC ACACCATCGC CGTCTACAAC
GAGACCTGGC ACCAGGGCGT GATCGGCATC GTCGCCTCGC GGCTCAAGGA CAAGTTCCAC
CGGCCGGTGA TCACCTTCGC GCCGGGCGAC GACGGCGTCA TCAAGGGCTC GGGCCGCTCC
ATCCCCGGCT TCCACCTGCG CGATGCGCTG GACGCCGTGC ACAAGCGCTG CCCCGGGCTG
ATCGTCAAGT TCGGCGGCCA CGCGATGGCG GCCGGGCTGT CGCTGCATGC GGACGGCTTC
GACCGCTTTG TCGAGACCTT CGAGGCGGTC GGCCGCGAAT GGCTGGACGA GTCCCTGCTC
TCGCGGGTGC TCGAAACCGA CGGCGAGGCC GAAGCGGAGT GCTTCACGCC GCAGTTCGTG
GAGCTGCTCG AAACCCACGT CTGGGGCCAG GGCTTTCCGG CGCCGAGCTT CTGCGGCGAG
TTCGACGTGC TGTCGCAAGC CGTGCTCAAG GACAAGCACC TGAAGCTGCA GCTCGGGCGC
GGCAAGCAGC GCTTCGACGC GATCTGGTTC AACCACGCCG AACCGCTCGG CGCCTCGGCG
TACGTGGCCT ACCGGCTGGA CAACAACACC TTCAACGGCA TCACCCGCGT GCAGATGGTG
ATCGAGCACG CGCAGTAG
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| Protein sequence | MTRIAIRPHS AETASLLAGH GIHPILARIL AARGVARPSE LSTELTDLLP PAQLKGIDDA
ARYLADAIAA GKRLLIVADY DCDGATACAV GVRGLRMLGA QVGYIVPNRF EYGYGLSPEI
VALAARERPD VLVTVDNGIA DVAGVAAANA LGIDVVVTDH HMPGAQLPEA RVIVNPNQPG
CGFPSKHLAG VGVMFYVLLA LRAELRNRGA FTPQNQPRLD ALLDLVALGT VADVVRLDAN
NRLLVAQGLK RMRAGRMCAG IAALFRVAGR EARRASTFDL GFGLGPRLNA AGRLADMSLG
IECLLTDDFD RAMAIAAELD GMNRERREIE AGMQQEAMAI LASTLAGMDG AGRHTIAVYN
ETWHQGVIGI VASRLKDKFH RPVITFAPGD DGVIKGSGRS IPGFHLRDAL DAVHKRCPGL
IVKFGGHAMA AGLSLHADGF DRFVETFEAV GREWLDESLL SRVLETDGEA EAECFTPQFV
ELLETHVWGQ GFPAPSFCGE FDVLSQAVLK DKHLKLQLGR GKQRFDAIWF NHAEPLGASA
YVAYRLDNNT FNGITRVQMV IEHAQ
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