Gene RSc1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1112 
Symbol 
ID1219925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1168754 
End bp1169173 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content73% 
IMG OID637237479 
Productputative transcription regulator protein 
Protein accessionNP_519233 
Protein GI17545831 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0169999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.208318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAGCG CGCGGCGCAC GCTCGCCCGG CGCTTCGACG AAGCCTTGCG GCCGCTGGAC 
CTGACCAATG GGCAGTTCTC GCTGCTGATG TCGCTGAACC GACCGCAGCC CGCGTCGATG
GGCGAAGTGG CCGAACTGCT GGCGATAGAC CGGACCACGC TCACCGCGGC GCTCAAGCCG
CTGGAGCGCC GCGGCCTGGT GGCGATCGAG GCGAACCCGG CCGATCGGCG CAGCCGGCTG
CTGCGCCTGC GCCCGGCCGG CCTGAAGGCG CTGACCCGCG CACTGCCGGT CTGGCAGGCA
CTGCACGGTG AGATCGACGG CACCCTCGCG CACGCCGAAG CGCAACGCCT GCGCGACAAC
CTGCGGACCC TGACGAGCGA CACCCGCGTC AGCCCGCCAG CCAGCGCACC CCGGCGTTGA
 
Protein sequence
MCSARRTLAR RFDEALRPLD LTNGQFSLLM SLNRPQPASM GEVAELLAID RTTLTAALKP 
LERRGLVAIE ANPADRRSRL LRLRPAGLKA LTRALPVWQA LHGEIDGTLA HAEAQRLRDN
LRTLTSDTRV SPPASAPRR